Nymphaea colorata (blue-petal water lily): 116255172
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Entry
116255172 CDS
T07418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16-like isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116255172
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116255172
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
Pre-60S particles
Helicases
116255172
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FakA-like_C
Motif
Other DBs
NCBI-GeneID:
116255172
NCBI-ProteinID:
XP_031486808
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All DBs
Position
5:12401849..12412747
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AA seq
612 aa
AA seq
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MAVEESEKIAKRADSKEVDEEEEEDDDEIRSFEEMGLDPRLIRALSKKGITQPTPIQSAA
IPRILQGKDVVARAKTGSGKTYAYLLPMLQKLFSEASQAAKAAPRAVVLVPTRELTQQVY
LEISSLLELCRTLLKVVQLTAAMSDADLQAAFIGSPDILVSTPACISKCLSKGVLQSSSF
QGSLSMLVLDEADLLLSYGYEEDLSTLAPHVPRHCQCLLMSATLSADVDKLKNLVLHSPY
ILTLAEDVNPKEGIVPRSVQQFWISCSAQDKLVTILALLKLELVQKKVLIFVNSINMGFK
LRLFLEQFGIKTAVLNAELPQNSRLHILEEFNASLFDYLIATDDCKVETEESNKKINVSE
KKSKKRWKQKLDSEFGVVRGIDFKHVFTVINFEMPQSPSRYVHRIGRTGRAHNTGASVSL
VSPDEEEVFEEIKTMLGDSDGPDSSKLIAPFPLLSKSAVDNLWYRAQDVAKGITRANIRE
SRAQDLRNEILNSEKLKAHFEHNPRDLDLLKHDKVLSKKPPPSHLKAVPDYLLDPVTEEA
RKIVKLSRAAMPKAGSSRRHHGSKGKFRRSKDPLKTFSAENHKKGRRHDGKRKEDRTEAS
ENRSWKKAKSSS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgaggaaagcgagaagatagcaaagagagcagattcgaaagaagtagatgaa
gaagaagaggaagacgacgatgaaatccgaagcttcgaagagatgggtttggaccctcgc
ctcatacgtgctctctcaaagaagggcatcactcaacccacccccatccaatctgctgcc
atccctcggattcttcaaggcaaagatgtggtcgcccgtgcgaaaaccggttctggtaaa
acctatgcctatctgcttcctatgctccagaaattgttctcggaagccagccaggccgcg
aaagctgctccgagggccgtggttcttgttccaacccgggagctaacccaacaagtttac
ttggagatttcatctctgcttgaactttgtagaactctattgaaagttgtacagttgaca
gctgccatgtccgatgctgatttacaagcagcatttattggttctcctgatattctggta
tcaacgccagcctgcatttccaaatgtctgtcaaaaggcgttcttcaatcatcatctttt
cagggatcactttccatgttggttttggatgaggctgatcttttattgtcctatggatat
gaagaggacttgagtacccttgctcctcatgttcctcgccattgccaatgtcttctcatg
tctgcaactttaagtgctgatgtcgataagttgaagaatcttgtcttgcatagcccttat
attttgactctagcagaagatgtcaatccaaaggagggaattgttccaaggagtgtacaa
caattttggatatcttgcagcgctcaagataaactggtgactattcttgctcttttgaag
ttggaactggtccaaaagaaagtgctgatctttgtcaacagtatcaatatgggctttaag
ttaagactctttctcgaacagtttggaattaaaactgcagtgctgaatgctgagttacca
cagaactcccggcttcatattctagaggaattcaatgcatcactttttgattatctaata
gctaccgatgactgcaaagtggagacagaagagtccaataagaagatcaatgtgtctgaa
aaaaagtccaaaaaaagatggaagcagaagttggactctgagtttggtgtggtgcggggc
attgacttcaaacatgtcttcacagttataaattttgagatgcctcagagtccttcgaga
tatgtacatcgaattggacgtactggaagagcacataataccggtgcatctgtatccctt
gtttctccagatgaggaagaggtctttgaagagattaaaactatgcttggcgattctgat
ggtcccgattcgtcaaagttgattgcaccctttcctctactctcaaaaagtgctgtggac
aacttgtggtatagagcccaggacgttgctaaagggatcacaagagctaacattagagaa
tcgcgagctcaggatctgaggaatgagattcttaactcagagaagttgaaggctcatttt
gagcataatccaagagatttagatttactaaagcatgacaaggtgctgagcaagaaacca
cctccatctcatctgaaagcagttcctgattacctgctggatccagtcacggaggaagct
aggaagattgtcaagctctccagggctgcaatgcccaaagctggttcttcccgtcgtcat
catggttcgaagggaaaatttcgtagaagtaaagatccattgaagactttctcagctgag
aatcacaaaaaaggtcgccgccatgatgggaaaaggaaagaagacagaactgaagcatcc
gagaataggagttggaagaaggcaaaaagcagtagctag
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