Nymphaea colorata (blue-petal water lily): 116255333
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Entry
116255333 CDS
T07418
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116255333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116255333
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116255333
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
116255333
NCBI-ProteinID:
XP_031487007
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Position
1:32954249..32960218
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AA seq
583 aa
AA seq
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MSVARRKKDAAGGEEDARVSSFPDEVLEHVLVFLKSHKDRSAVSLVCKDWYAAERWSRTH
VFIGNCYSVSPQILVRRFPNIRSITLKGKPRFSDFNLVPPHWGADIHSWLVVLAKAYPFL
EELRLKRMTVTDESLDFLATSFPNFRALSLVSCDGFSTDGLASIATHCKNLTEMDIQEND
VLDLGGHWLSCFPESFSSLEILNFASLNSEVSFDALERLVSRCKSLKVLKVNKCVSPEQL
QRLLVKVPNLVDLGTGSLLQELTIRQFAEVKSALGNCKKLHTLSGLWEVTSLYIPALSLA
CANLTFLNLSYAVLQNTELAQLLAGCPQLRRLWVLDTVEDKGLEAVASACPGLEELRVFP
AAPYEPDLSGVTESGFVAVSRGCPNLRYVLYFCRRMTNAAVETVAKNCPNFTHFRLCIMN
PCEPDYLTNDPMDEGFGAVVKHCSKIQRLAVSGLLTDRSFEYIGLYAKNLETLSVAFAGS
SDRGMQYVLQGCPKLRKLEIRDCPFGNAALLSGLERYEQMRSLWMSACRVTMSACRILAR
EMPRLNVEVIKDPEGDEAHADKVYVYRSVAGPRTDAPPFVLTL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcaaggaggaaaaaggacgctgcaggcggggaggaggacgccagagtttcc
tccttccctgatgaagttctggagcacgtccttgtcttcttgaaatctcacaaggatcgc
agcgcggtttcactcgtatgcaaggattggtacgccgcggagaggtggagcaggactcat
gtgttcatcgggaactgttattctgtctcgccacagatcctggtccggcgatttcctaac
atccggagcatcacgctcaaggggaagcctcgattctccgatttcaacctcgtcccgccg
cattggggtgcggatatccactcatggctggttgttctggctaaggcgtatcctttcttg
gaggaactcaggctcaagaggatgactgttacggatgagagccttgattttctagcgacc
tccttcccgaacttccgggcactgtcgctcgttagctgtgacggattcagcacggatggc
cttgcgtcgattgctacacattgcaagaacttaacggagatggacatacaagagaatgac
gtacttgaccttggagggcactggctaagttgttttcctgaaagtttttcatctcttgag
atcctcaattttgcaagtctcaatagtgaagtaagcttcgatgctctagaaaggcttgtg
tcacggtgcaaatcactgaaggttctgaaagtaaacaaatgtgtgtcaccagagcagttg
cagaggcttcttgttaaagttccaaacctggtggaccttggcactgggtcacttttacag
gaacttactattcggcaatttgctgaggtgaaaagtgcattgggcaactgtaaaaaattg
catactttatctggcttgtgggaagtaacgtcgttgtatattcctgctctatctctggct
tgtgcgaaccttacatttttgaatttaagctatgctgtccttcaaaacacagagttggct
cagctgcttgcaggatgccctcagcttcggcgcttatgggtcttggacaccgttgaggac
aaagggttggaagctgtggcatctgcatgcccaggcctggaagaactacgtgtttttcct
gctgctccttatgaaccagatcttagtggtgtgacggagtctggtttcgttgctgtttct
cgtggttgcccaaacttgcgctatgtactttacttctgtaggcggatgacaaatgctgct
gtcgagacggtggccaaaaactgtcccaactttactcacttccgtctttgtattatgaat
ccctgtgagcctgattatttaacaaatgatccgatggatgaaggttttggtgctgtggtc
aagcattgcagcaagatacagaggcttgctgtatctgggcttctcactgaccgctcattt
gagtacattggtttgtatgctaagaacttggagacactctcggtcgcatttgcaggcagc
agcgatcggggaatgcagtatgtgttgcaagggtgccccaaactgcggaaactagagatc
agggattgcccatttgggaatgctgctctgttgtcagggctggagcgttatgaacagatg
cgctcgttgtggatgtctgcatgcagggtgacgatgagtgcctgcaggatactggcaagg
gagatgcctaggctaaatgttgaagtgattaaggatcccgagggtgatgaggcgcatgca
gataaagtgtacgtctacaggtcggtggctggccccagaactgatgcgccaccctttgtt
cttacgctctga
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