Nymphaea colorata (blue-petal water lily): 116255461
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Entry
116255461 CDS
T07418
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116255461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncol03041
]
116255461
Spliceosome [BR:
ncol03041
]
Complex A
Other components
Complex A specific factors
116255461
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
RRM_5
zf-CCHC
KH_PNO1_2nd
eIF3g
RRM_7
RapA_C
PHD_4
Motif
Other DBs
NCBI-GeneID:
116255461
NCBI-ProteinID:
XP_031487149
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All DBs
Position
6:2393523..2400929
Genome browser
AA seq
775 aa
AA seq
DB search
MEGPVPVEMHVPYSENSANGDAAYLQNPSSPPPGNPPLPPEEPTSPFQAGPSPPPPPRSP
NPYGPPHEGNPNPNLPPADKHPNAHRTDFVPPPQSESATGTTTTTPSGNVGGEGSGGEDE
TATSRRRRRSRWEPQLESEGDGAASGGRKRKSRWADDDPKPLIQLPDFMKDLAELDPEVQ
ALNLRLLEISRLLQSGLPLDDRPEGARSPSPEPIYDNMGVRINTREFRARERLNRERQEI
ISQLIKRNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAK
IVIRGKGSVKEGRLQQKRDLRPDPAENEDLHVLVEAETQEALDAASSMVEKLLQPVDEVL
NEHKRQQLRELAALNGTIREDEFCRLCGEPGHRQYACPARMSTFKSDVCCKICGDGGHPT
IDCPVKATTGKKMDDEYQNFLAELGGGGGPGGSTASGGATLAITGQTGGNPPWANGSSAT
SAAATTDSSGKLGLPGAKEYDDTNLYIGYLPPNLEDDGLIRLFASFGDIVMAKVIKDRVS
GLSKGYGFVKYSDANQAAQAIAAMNGYRLEGRVIAVRIAGKPPQPPTPTVVAPQPPAGAT
FSSADPNSYSSSQSYAPPPVPPPPVPYMGAVPPPWGPPVPWAPPQPVPNYGMQYPAMGGY
PHAAPVPPPTSSAGTDASQGFSYVGMSTPPGVQPAYAPGAPPPPPPPPGSYPMYYGMQPP
PPVSVPAGVGTADASQAMSMPVPWAPNPSSQLGSASADQNAAGDPEYEKFMSEMK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggagggtccagtgcctgtagagatgcatgttccgtactcggaaaactcggccaatgga
gacgctgcctacctccaaaatccgtcgtcacctccgccaggaaaccctcctctccctccg
gaggagccgacttccccattccaggcagggccctcccctccccctcctccccgctccccc
aacccatacggccctcctcatgaaggaaaccctaaccctaatcttcctcctgcggacaag
caccccaacgcccaccgaaccgactttgtgccgccgccacaatctgaatctgcgacggga
acaaccaccaccaccccgagcggcaacgtcggcggggaagggtctggaggcgaagatgag
acggcaacgagccgccgccggcgccgatcacgctgggagccgcagctggaatccgagggc
gatggcgctgcttccggtggccgaaagaggaagtcccgttgggcggatgacgaccccaaa
ccgctgatccagctaccggatttcatgaaggatctcgccgagctcgatcccgaggttcag
gccttgaatttgcgcctccttgagatctcccgcttattgcagtcgggccttccgctggat
gaccgaccggagggagcgagatcaccgtcgcctgagccgatctacgacaacatgggtgtt
aggatcaacaccagggagttccgtgcccgagagcgtcttaatcgcgagcgtcaagagatt
atatcgcagctgatcaagcgcaatccagcattcaaaccgccagcggattatcggccgccg
aagttgcagaagaaactctacatcccaatgaaggagtacccgggatacaactttatcggg
ctcatcattggccccagaggtaacactcagaagcggatggagaaggagacgggcgccaag
atcgtcatccgcggcaagggttctgttaaggagggccgtctgcagcagaagcgtgatctg
cgcccagacccggctgagaacgaggacctccacgtcctagtagaggctgagacgcaggag
gctctcgatgccgcctccagcatggtggagaagctactccagcccgtggatgaagtgctg
aacgagcacaaaaggcaacagctcagggaattagccgcgcttaatgggacgattcgggaa
gatgagttttgcaggttgtgcggtgagcctggccaccgtcagtatgcttgtccagcaagg
atgtctaccttcaagagcgatgtttgttgcaagatttgtggtgatggagggcaccccact
attgattgcccggtgaaggcaacaaccgggaaaaaaatggacgatgagtatcaaaatttc
ctggctgagctcggaggtggaggggggcctggtggatctaccgcctccggaggagcgacc
ttggcgatcacgggacaaaccggcggaaaccctccttgggctaatggtagttctgcaact
agtgctgctgccaccaccgattcttcaggaaaattgggtttgcccggcgccaaggagtac
gatgacacaaatctttacataggatacctccctccgaatctggaggatgatggcttgatt
cggttatttgcctcattcggagatatagtgatggccaaggtgatcaaagatagagtgtca
gggttgagtaaaggatacgggtttgtgaagtactcggacgccaaccaggcagctcaagcg
atcgctgccatgaatgggtatagattagaaggcagggtaatagctgttaggattgctgga
aagccgccccagccaccgaccccgacagtggtggctccacagccacctgctggagcaaca
ttttcgagtgcagatcctaattcctattcatcttcacagagttatgctccgcctccagtt
cctccaccaccggttccttacatgggagcggtccctccaccatgggggcctccagttcca
tgggcaccgccgcagccagtgcctaattatggaatgcagtaccctgcaatgggtggctat
ccccatgcagccccagtgccccctcctacttcgagtgctggtaccgatgcttcacagggc
ttctcttatgtggggatgtcaactcctccaggagttcagccagcttatgcaccaggtgct
cctcctcctcctccaccgccaccaggtagttacccaatgtactacgggatgcagcctcct
ccaccagtgtcagttcctgcaggtgttggcacagcagacgcatcccaagctatgagcatg
ccagtcccatgggcgcctaatccatcttcgcagcttggttctgcttctgccgatcaaaat
gcagctggagatcctgagtatgagaaattcatgtcagagatgaagtga
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