Nymphaea colorata (blue-petal water lily): 116255751
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Entry
116255751 CDS
T07418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32-like isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116255751
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116255751
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
90S particles
Helicases
116255751
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
DUF6291
Motif
Other DBs
NCBI-GeneID:
116255751
NCBI-ProteinID:
XP_031487572
LinkDB
All DBs
Position
6:complement(10894887..10911301)
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AA seq
734 aa
AA seq
DB search
MRKQKPRKKQGDVNEEADEIKLLELWIESGKPDSGTNPLSISGVPEVGLVGQMDNGSFSP
YVGCTRFDQLPLSQRTKDSLRDKFTVMSDIQRATLPHSLCGRDVLGAAKTGSGKSLAFII
PVLEKLYRARWGPEDGVGCIILSPTRELASQLFKVLEMVGKYHGFSAGRLIGGSKSVDIE
KERVNGINILVCTPGRLLQHMDETPNFDCSQLQILVLDEADRILDLTFKKDLNAIISQLP
RQRQTLLFSATQTKSVQDLARLSLKDPERLSVHEESVTATPERLMQRSMIVPLDKKLDML
WSFIKSHLNAKILVFLSTCKQVKFVYEAFKKLRPGIPLKCLHGRMNQNKRMAIFFQYCEE
RRSVLFSTDVASRGLDFPAVEWVVQVDCPEDVAAYIHRVGRTARFSSGGRSLLFLMPSEK
QVIINLQDAKIPVQMWKANNKKIQSISGALAALLVQYPELRRLAERAFITYLKSLKWQAS
GLEFDWNSLPILEFSISYGLPMAPKCRFLNKKLQGGENGHASETLETKIEKGDGGDREFD
DILLPRNSLTEAGPNDDTYGLATRILKKKKLKINVDRPAGLKFVFDEEGNALPPLAAYAN
AVIEDSVIEPEKVRERYQKLREEMKVWDQEDKVLLKRRLRERRILDKMKYKKKLAREIDD
EDEPANSDGEVSNHLNQLTRGSKVYFGSESSDEGEVTCDGPDNKKIKRELNAKVDTISLV
EQEALALKLLNSLH
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacagaaaccgaggaagaaacagggagatgtaaatgaggaggcagatgagatc
aaactgcttgagttgtggatcgagtcagggaaacctgattcagggaccaatcctctctcc
atttctggtgttcctgaagttggccttgtgggccagatggacaatggctccttttcaccc
tatgtgggttgtacccggtttgatcaattgcccttatcccagagaaccaaggatagcttg
cgggacaagttcactgtcatgagtgacattcaaagggctactctccctcattcactttgt
gggagggatgttcttggtgccgccaagactggctctggaaaatctctggctttcattatc
ccagttctagagaaattatacagagcaagatggggcccagaagatggagttggatgtatt
atattgtctccaacaagagaattggcatcacaactttttaaagtattggaaatggttggc
aaataccatggttttagtgcaggtcgtctgattggtggttccaaaagtgttgatatagag
aaggaacgtgtgaatggtataaatatattggtctgcactcctggtcgacttcttcaacac
atggatgaaaccccaaattttgattgctcgcagctgcaaattttggttcttgatgaggca
gaccgaattctcgatttgacattcaagaaagatttaaatgcaatcatttcacaactacca
cggcagcgccagactttgcttttctctgctactcagacaaagtcagttcaggatcttgct
aggctgagtctgaaggacccggagcgcttgtcagtgcatgaggagtctgtgactgctaca
cccgagcgtctaatgcaacgttcaatgattgttccacttgataaaaaattggatatgctc
tggagttttatcaaatcacatcttaatgcaaagatacttgtgttcctttcaacatgcaag
caggtgaaatttgtttatgaagcttttaagaaactgcgtcctggcattcctttgaagtgt
cttcatggtcggatgaatcagaataaacgcatggcaatatttttccagtattgtgaggag
agacgctcggttcttttctctacagatgtagcatcaagaggtcttgatttccctgcagtt
gaatgggtcgtgcaggtagactgccctgaagatgtagcagcttatatacatcgggttggt
cgcactgctcgattctcgtctggaggaagatcccttttgttcctgatgccttcagagaag
caagtcataataaatttacaggatgcaaagatcccagttcagatgtggaaggcaaacaat
aagaaaatccaatcaatttctggagccctagctgcgttgcttgttcaatatccagaactg
cggaggctagctgaaagggccttcataacgtacctgaagtccctaaagtggcaggccagt
ggacttgagttcgattggaacagcttgccaatattagaattttccatctcctatggtttg
cctatggccccaaaatgtagattcctgaacaagaaacttcaaggtggagaaaatggtcat
gccagtgaaaccctggaaacgaagatagaaaaaggagatggtggagatcgagaatttgat
gatatccttttgccaagaaattcattgactgaagctggaccaaatgatgacacttacggt
ttggcaacaagaattttgaagaagaagaagctgaaaatcaatgttgatcgtccagcaggt
ttgaagtttgtatttgatgaagaggggaatgctttgcctcctcttgctgcatatgcaaat
gcagtaattgaggatagtgttattgaacctgaaaaagtaagggagcgataccagaagctg
agagaagagatgaaggtttgggatcaggaggataaggtgcttctgaaacgacggctgcgt
gaaaggagaatcctagataagatgaagtacaagaaaaagttggctagagaaattgatgat
gaagatgagcctgcgaactctgatggtgaagtcagcaatcatttgaaccaactaacgagg
ggatcaaaagtgtacttcggtagtgagagttctgatgaaggtgaagttacatgtgatggt
cccgataataagaaaatcaagagggagttgaacgctaaagtagatacgatttccttagta
gagcaagaagctcttgccctcaagttgttaaattctttgcattga
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