Nymphaea colorata (blue-petal water lily): 116255771
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Entry
116255771 CDS
T07418
Name
(RefSeq) coatomer subunit beta'-1-like
KO
K17302
coatomer subunit beta'
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116255771
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncol04147
]
116255771
Membrane trafficking [BR:
ncol04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
116255771
Exosome [BR:
ncol04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116255771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
NBCH_WD40
PEP5_VPS11_N
WD40_like
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Nup120_160
HEAT_GCN1
Beta-prop_WDR35_TULP_N
TPR_2
WD_LRWD1
TPR_1
Clathrin
TPR_GEMI5
TPR_8
Exo5
Motif
Other DBs
NCBI-GeneID:
116255771
NCBI-ProteinID:
XP_031487617
LinkDB
All DBs
Position
6:complement(3239983..3258403)
Genome browser
AA seq
904 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGSVCIWNHQSQTMVKSFEVTELPV
RSAKFIARKQWIVAGADDMIIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQVFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHMKGVNCVDYFTGGDRPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYIKGSNRVVIGYDEGTIMIKIG
REEPVASMDSSGKVIWAKHNEIQTVNIRAVGADYEVTDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSEGEYAVRESTSRIKIFNKNFQ
EKKSIRPTFSAERIYGGTLLAICSNDFICFYDWGECRLIRRIDVNVKNLYWADSGDLLSI
ASDTSFYILKYNRDIVAMHLDSGNSVDEQGVEEAFEVLHEVNERVRTGIWVGDCFIYNNS
TWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERASEVLPSIPKEHLNSVARFLESRGMLEDALEVATDPNYKFDLAVQLGRLEVAQA
IATEVQSESKWKQLGELAMSKGRLEMAEKCLVQAMDLSGLLLLYSALGDAEGMSNLVALA
KDQGKNNVAFLCLFMLGRLEECLQLLVASNRIPEAALMARSYLPSKVSEIVALWRNDLNK
VNRKAAESLADPDEYPNMFDDWQIALAVEAGLADERGHYPPAEEYLDYSEKRQINLVEAF
RNMQLDDGTTVPMQNGDLVHEEVEGEVEEQVDVEAENSVDSAILVNGHETDEKWSVNHDG
IPLA
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgaggctcgaaattaagaggaaacttgctcagagatccgagagagtgaaatca
gtagatctgcatccgacagagccatggattctagcgagcctttattctggatcagtttgc
atctggaaccatcaatcacagacaatggtgaagtcatttgaggtcacggaacttcctgtg
cgatctgcaaagtttatagctcgaaaacagtggatagttgctggcgctgatgacatgata
attcgtgtttataactataataccatggacaaagtgaaggtatttgaagcacatactgat
tacattaggtgcgtggcggtgcatcccacattgccatatgtgttgtcatcatctgatgac
atgctcatcaagctctgggattgggaaaagggatggatgtgtactcaggttttcgagggg
cattcacattatgtcatgcaagtaacatttaatccgaaggacacaaacacttttgctagt
gcctctctggatcggacaatcaagatatggaatctgggctcaccagaccctaacttcact
ttggatgcccacatgaagggggtaaactgtgttgattacttcactggaggagaccgacct
tatctaattacaggatctgatgatcatacagccaaggtgtgggactatcaaaccaaaagt
tgtgttcaaaccttagaaggccacacacacaatgtttcagccgtttgttttcaccctgag
ctccccatcatcattactggttctgaggatgggactgttcgcatatggcattcaactact
tataggttagagaacactctgaattatggcctcgagagagtctgggcagttggttatatt
aaaggatctaatcgggttgtaataggatatgatgagggcacaattatgataaaaattggc
cgtgaagaaccagtggcaagcatggatagcagtggaaaggtcatctgggccaagcataac
gaaattcaaactgttaacatcagagccgttggagcagattatgaggtcacagatggagag
agattgcctctggctgttaaagagttgggaagctgtgatttataccctcagagtttgaag
cacaatccaaatgggaggtttgttgtggtctgtggagatggagaatacatcatttacacg
gctctggcatggagaaacaggtcttttggctcagcccttgaatttgtttggtcatctgag
ggagaatatgctgttagagagagtacctcaagaataaaaatatttaataaaaactttcag
gagaagaaaagcatcaggccgacgttttctgcagagcgaatatatgggggaactttgttg
gcaatttgttcaaacgatttcatttgcttctatgattggggtgaatgtaggcttatccgt
cgcatagatgttaatgttaaaaacttgtattgggcagacagtggggatctgctttcaatt
gctagtgatacttccttctacattttgaaatataatagagacattgtggctatgcattta
gatagtggaaattcagtagatgagcaaggtgttgaagaagcattcgaggttctccatgaa
gtgaatgaacgtgtacgaacgggaatctgggttggagattgtttcatttacaacaactct
acttggagattgaattactgtgttggtggtgaggtaaccaccatgtttcacttggatcgg
ccaatgtacttacttggttaccttgcaagtcagagtagagtttatcttatagacaaagaa
tttaatgttatgggatatactctgcttctcagtttgattgagtacaaaactcttgttatg
cgtggagatctggaacgtgcaagtgaagtattaccctcaatacccaaggagcatctcaat
agtgtggcccgtttcttggaatctcggggaatgttagaggatgcattagaagtggcaacg
gaccctaactataaatttgacctagctgtacaacttggaagattggaggtagcacaggct
attgccactgaagtgcaaagtgaatctaaatggaaacagttgggagaacttgcaatgtcc
aaggggaggttagaaatggcagagaaatgtttggtccaggcaatggacttgagtggttta
ttgcttctctattcagctcttggagatgctgaaggaatgtcaaatcttgtggcacttgct
aaggatcaaggaaagaataatgttgccttcctttgccttttcatgcttggtagattggaa
gagtgtcttcagttattggtggccagcaataggataccagaggctgctttgatggcacgg
tcttatcttccaagtaaagtttctgaaatagtggctctttggaggaacgacctaaacaag
gtgaatcggaaagctgcagagtcattggcagatccagatgaataccctaatatgtttgat
gactggcaaattgcacttgcagttgaggctggccttgccgatgagaggggtcattatcca
ccagctgaggagtacctagattactcggaaaaacgccaaatcaaccttgtggaagcattt
aggaatatgcaacttgatgatggcacaacggtgccgatgcaaaatggagatttggtccat
gaggaagtggagggagaagttgaggagcaagttgatgtagaagcagaaaattcagtagac
agtgccattcttgtcaatggtcatgagactgatgaaaagtggagcgtgaatcatgatgga
attccgttggcgtag
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