Nymphaea colorata (blue-petal water lily): 116255918
Help
Entry
116255918 CDS
T07418
Name
(RefSeq) polygalacturonase ADPG1-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Module
ncol_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116255918
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116255918
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
116255918
NCBI-ProteinID:
XP_031487863
LinkDB
All DBs
Position
6:4511065..4521611
Genome browser
AA seq
455 aa
AA seq
DB search
MAPDLGRNNEISEDYDKAESTEKPERSLCPLKEKRSPPTPEVDAFVSSPESLVTACLSDL
LPAISGHPDVTGETGACLVQECNGFNVINFGAVGDGKTDDTQAFLKAWTAVCGTTRAATL
FVPGWRTFLVGSSQFNGPCQSNSVRVMVIGNISAPSSLSAWVGKNRYAWLSFNRVHGLTI
EGPGTLNGQGANWWLCRQKPEQPCSSAPVALMINQCQYVTVNGLRSLDSQGVHLKVVYSN
HVYLNDITIQAPEDSPNTDGINIGASQFVYINKASIKTGDDCISMIVGSFDINITEVTCG
PGHGVSIGSLGQDGNTESVGRIHVKNVSFTNSMNGVRIKTWQGGSGFVRNVKFEQLQFRN
TGNPIVIDQYYCPHSSCKEQPSAVKISEVSFTQAVGTSSSEVAINLNCSRTVACTGIILE
NVRLKSADSSRPVKANCINAFGNTDTVNPVVPCFD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgatttgggaagaaacaacgagatctcggaagattacgacaaggcagaaagc
acagaaaaaccagagcgatctctgtgccctctcaaggagaaaaggtctcctcctacaccg
gaagtagatgccttcgtctcctccccagaatccctggttacagcctgtctctcagatctg
ttacctgcaatatccggtcatcctgacgtcaccggggaaacaggtgcatgtctggttcaa
gaatgcaacggcttcaatgtgatcaacttcggggctgttggtgatggcaagacagacgac
actcaggcattcttgaaggcgtggacagcagtatgtggcacaacaagggcggcaacactt
ttcgttccaggatggaggacgttcttagtaggctcatcccagttcaacggcccatgccaa
tctaactctgtgcgtgtcatggtgattgggaatatatcggcacccagctccctgtctgcg
tgggtaggcaaaaacagatatgcttggcttagcttcaaccgggtgcatggattgaccatt
gaagggcctggcacactcaacggccaaggtgcaaattggtggttatgtaggcaaaagccc
gagcagccatgttcatctgcaccagtggcattaatgataaatcagtgtcaatacgtgacg
gtaaatgggctgcgctccttagacagccagggggttcacttgaaggtagtgtattcgaat
cacgtgtacctaaatgacatcaccattcaagcaccagaggacagcccaaatactgatggc
ataaatattggggcttctcagttcgtttatatcaataaagcttccatcaaaacaggagac
gattgcatttccatgatagtagggagctttgacataaacatcacagaggtcacctgtggc
cctggccatggtgttagtatcggaagccttggccaggatggaaacacagaatctgttgga
aggatacacgtcaaaaacgtctcatttactaacagcatgaacggcgtccgcatcaagact
tggcagggtggatctggattcgtccgaaacgtcaagttcgagcagctgcagtttaggaac
acaggcaaccccatagtcattgaccagtactattgtccccatagttcatgtaaggaacag
ccctcagcagtgaagattagcgaagtgagcttcacacaagcagttggtacgtccagctct
gaagtcgccatcaacctgaactgcagcaggaccgtcgcctgcacaggcatcatcttggag
aatgtccgtttgaagtcggccgactcaagccgtcctgtgaaagctaactgcatcaatgca
tttggaaatactgacaccgtcaatccagttgtgccttgttttgactag
DBGET
integrated database retrieval system
