Nymphaea colorata (blue-petal water lily): 116255963
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Entry
116255963 CDS
T07418
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116255963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncol02000
]
116255963
Transporters [BR:
ncol02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116255963
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_29
RsgA_GTPase
nSTAND3
MukB
Motif
Other DBs
NCBI-GeneID:
116255963
NCBI-ProteinID:
XP_031487922
LinkDB
All DBs
Position
1:complement(41563108..41602436)
Genome browser
AA seq
1916 aa
AA seq
DB search
MDERSRRHLKAILRKNWLLKCRHPFTTSAEVLLPTIVMLLLIAVRTRVDTEVHPTQPYIR
KGMFVEVGAGGLSPSFDALLKLWLATDEHLAFAPDTTETRNMLNLLSLRFPLLKIVGQIY
KDELEIESYIRSNHYGQRDQIMNFSKPKIKGAVIFHECGPQIFDYSIRLNHSWAFSGFPD
VNTIMDTNGPYVNDLELGVSAVPTMQYGLSGFLTLQQVMDSLIIFSSQINLTDVVGNMKF
VDDGGSSELYASEVTAEDKKQQLVGNFVDQLHFKYPWTKFIPSTIRIVPFPTREYTDDEF
QSIVKRVMGVLYLLGFLYPVSRLISYSVSEKEQRVREGLQMMGLRDNIFYLSWFITYTAQ
FAVSAAIITCCTMTTLFHYSDKTVVFTYFFLFGLSAIMLSFLISTFFSRAKTAVAVGTLT
FLGVFFPYYTVNDPATSMMWKAIASLLSPTAFALGTVNFADYERAHVGVRWSNIWRDSSG
VNFLICLCMLIFDSVLYCVIALYLDKVLPREYGVQKPWNFLFTKSFWKKKSCNPDLYNET
FKDEWEHKSASHVESLDGYQPIVEPISLEMRKQEADGRCVQIRHLSKVFKTKKGKCCAVN
SLQLTLYENQVLALLGHNGAGKSTTISMLVGLLAPTSGDAVVFGKNIKTDMDQIRKELGV
CPQNDVLFPELTVKEHLRMFAILKGVTEDRLENEVNLMIEEVCLLDKQNTAVRALSGGMR
RKLSLGIALIGGSKLVILDEPTTGMDPYSMRSTWQLIKRIKKGRVILLTTHSMDEADVLG
DRIAIMSNGYLRCCGSSLFLKHCYGVGYTLTLVKSNPDARTASDIVGRHVPSAICLSDVG
SEISFRLPLSSSSSFEGMFMEIESNTKRRGALLEKSGCSEESCIGIESYGISVTTLEEVF
LRVAGCDLDEIKPVILDKADHSDEWIPPHASSSCLTSNEPNGNLLLCAYWVPLGKTFSAL
GFIVNLIITTLFGFLNIFKLQCCGCGDLFRFRFCQHLRALLIKRATIARRDRKTIIFQLL
IPALFLFLGLLFLKLKPHPDQESITLTTSHFNPLLQGGGGGGPIPFNLSTQISNQVASFM
EGGWSQKAELRSYRFPNTGRALFDSIEVAGPILGPSLLSMSEYLITSLNESYQSRYGAVL
MDDQNGDGSIAYTVLHNCSCQHGAPTYINLVNSAILKLAMNDGNMVIHTRNHPLPMTATQ
HSQHHDLDAFSAAIIINIAFSFIPSSFAVAIVKEREVKAKHQQLISGVSVVSYWISIYIW
DFISFLFPTFLAMLLFAIFGLDQFIGVGCFWPTIFLFLEYGLAVAASTYCLTFFFTDHSV
AQNIVLLVHFFSGLILMVISFIMGLIKATKSVNIFLKKIFRLAPGFCFADGLASLALRRQ
GIKLSSGKAVLDWNVTGASLCYLGMESIIYFALVLGIELLPWHKLEFCKETSWWRQIIEG
SIRDIPEGTLEPLMRLRSSLECHKCGFDEDVDVQAERHRVLSGAAKNSIIRLSNLCKVYS
GGRQDFAKIAVDNLCFAVQEGECFGFLGTNGAGKTTTLRMLSGEECPTDGTAYIFGIDIR
INPKAACQNVGYCPQFDALLELLTVQEHLELYARIKGVPGNRIDDVVEEKLTEFDLWKQA
NKPSCYLSGGNKRKLSVAIAMIGDPPIVILDEPSAGMDPIAKRFMWNVISHLSTRQGKTA
VLLTTHSMSEAQALCTRIGIMVGGRLQCIGSPQHLKTRFGNHLELEVRPTDVTRCELDNL
CSKIQGLLSDFPCHPKGVLHDLEICIGGNDLILPADVSEICLSEEMVAFVGRFLENESRV
RTLLSGRLAADGVFSQQLSEQLARDGGIPLRIFSEWWLAEEKYSLIDSFILSTFHGAIFQ
GLSGLNIKYQLPYGEDSSLAEIFGHLERNRSKLGISEYSISQSTLETIFNHFAGNS
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcgctcccgtcggcatcttaaggccatcctccgaaagaattggctgctcaag
tgtcgccaccccttcacgacctcggcggaagttctccttccgacgatcgtgatgcttttg
cttattgccgtaaggacgagggttgacaccgaggttcaccccacgcagccatatattcgt
aagggcatgtttgttgaagtaggggctggtggcctatctccgagttttgacgcacttctt
aaattgtggctggctaccgatgagcacttagcttttgcgccagatacgacagagacgagg
aatatgctgaaccttttgtcactaaggttcccacttctgaagattgttgggcaaatttac
aaggatgaacttgagatagaatcctacatacgttcaaaccactatggtcaaagggaccaa
atcatgaatttttcgaagccaaaaatcaaaggagcagtcatctttcatgaatgtggacca
caaatatttgattatagcatccgcctaaaccattcgtgggcattttctggatttcctgat
gtcaacaccattatggacactaatgggccttatgtcaatgatttggagctgggtgtcagt
gctgtacctaccatgcagtatggcttgagtggcttcttaacactgcagcaggtcatggat
tcattaataatattttcatcccaaattaatctgactgacgtagttggtaacatgaagttt
gttgatgatggaggttcttctgaattatatgcttctgaggttactgcagaggacaaaaaa
cagcagctagtaggaaattttgtggatcaattgcatttcaagtatccttggacgaaattc
attccatccactataaggattgttccatttcctactcgtgaatatactgatgatgagttc
cagtcgatcgttaaaagagttatgggagtattgtacttgttgggatttctctatccagtg
tctcgtctaattagctactctgtctctgaaaaggagcaaagggtcagagaaggtctccaa
atgatgggacttcgggacaacatattctatctatcttggtttataacatacactgcacaa
tttgcagtgtcagcagcaattatcacctgctgcaccatgaccactcttttccattacagc
gacaaaactgtggtgtttacatacttttttctgtttgggctcagtgcaattatgctttct
tttctaatttcaacatttttttcaagagcaaaaacagctgttgcggtcggtactctaact
ttcctcggagtgttctttccttattacactgtcaatgatcctgctacttccatgatgtgg
aaggccattgcttccttgctttctcctactgcttttgcacttggaactgtgaattttgct
gattatgagcgtgctcatgttggagttcgttggagcaatatttggagggattcatctgga
gtgaatttccttatctgcctctgcatgcttatttttgactcggtattgtactgtgtcatt
gccttataccttgataaggttcttcccagggagtatggagttcagaagccatggaacttc
ttatttacaaaaagtttttggaagaagaaatcatgtaatcctgatctatataatgagact
ttcaaagatgagtgggaacataaatcagcctctcatgtggaatctttagatggttatcaa
cctatagtggaaccgataagcttggaaatgaggaagcaagaggctgatggtagatgtgtt
cagattagacatctcagcaaagtattcaagaccaagaaagggaaatgctgtgctgtaaac
tcattgcaattaacattgtatgaaaatcaggttctcgcacttctaggtcacaatggagct
ggtaaaagcacgacaatatcgatgcttgttggccttcttgccccaacatctggtgatgct
gttgtgtttgggaaaaatatcaaaactgacatggatcaaataagaaaggagcttggtgtg
tgcccgcaaaatgacgtgctatttcctgaattgactgtgaaggaacatctgagaatgttt
gccatcttgaaaggagtcactgaagatagactagaaaatgaagtgaatctgatgattgaa
gaagtttgcttgcttgacaagcaaaatactgctgttagagcattatcaggtggtatgagg
aggaagctgtccttgggaatagctcttattgggggcagtaagttggttattcttgatgaa
ccaactactgggatggatccatattcaatgcgctctacatggcagctgatcaagagaatt
aagaagggccgtgtaatcttactcacaacccattcgatggatgaagcagatgtgctaggt
gaccgcattgcaatcatgtcaaatggttatttacgatgttgtgggagttctctgttcttg
aagcattgttatggagttggctatacacttactttagtaaagagtaaccctgatgcacgt
actgccagtgacatagttggtcgccatgtgccttctgcaatttgtctaagtgatgtggga
agcgagatatctttcagacttccattgtcctcttcgtcatcctttgagggtatgtttatg
gaaattgaaagtaacacaaaaaggcgaggtgctttactggagaaaagcggttgtagtgaa
gaatcttgtattggtattgagagttatggtatatctgtgacaactttggaggaagttttc
cttagagttgctggatgtgatttggatgaaataaaacctgtcattcttgataaagctgat
cactcagatgaatggattcctccacatgcttcttcatcttgtcttacaagtaatgaacca
aatgggaatctgttactttgtgcttattgggtccctcttgggaagaccttttctgcactg
ggttttattgtcaatctgatcatcaccactttatttggtttcttaaatatatttaaattg
caatgctgtggctgtggagatctattcagattcagattctgccaacatttgagagctctt
ctcataaagagagccacaattgctcgaagagatagaaaaacaattatctttcagcttctt
atcccagctttatttttgttccttggtcttcttttcctcaagttaaaaccacatcctgat
caggaatcaataaccctgacaacatctcattttaatccattactacaaggtggaggtggt
ggtggtcctattcctttcaatctttccacacaaatatctaatcaggtggcatcatttatg
gaaggtggttggagtcagaaggctgagctgaggtcctacaggtttccaaatacagggaga
gcgctttttgattctattgaagtagctgggccaatattagggccatcacttttatctatg
agtgaatatctgataacaagcttgaatgaatcttaccagtcaagatatggtgcggtttta
atggatgaccaaaatggggatggcagcattgcttatactgtgcttcacaactgttcctgt
cagcatggagctccaacttatatcaatcttgtgaatagtgcaattctaaaacttgctatg
aatgatgggaatatggttattcatactcggaaccatcccctgccaatgacagctactcaa
cactcacagcaccatgatttggatgcattttcagctgcaattattattaatattgctttc
tcctttataccttcctcatttgcagttgctattgtaaaggagcgagaagtcaaggctaaa
caccaacagcttatcagtggggtgtctgtcgtgtcatattggatttccatatacatttgg
gacttcatcagctttctcttccctacttttctagcaatgcttctctttgcaatatttggc
cttgatcaatttattggggttggctgtttctggccaacaatattcttatttttggaatat
ggactagcagttgctgcttcaacatattgccttaccttcttctttacagatcattcagtt
gcacagaacatagtcctcttggttcacttcttcagtggccttattcttatggttatatca
tttataatgggcctcataaaagctactaaaagcgtgaatatttttcttaagaaaattttc
aggctagctcctggattttgttttgcggatgggcttgcttcgcttgctcttcgtagacag
ggaataaaactcagttcaggaaaggcagttttagattggaatgtcactggtgcttctctc
tgttatttgggaatggagagtatcatttattttgctttggttcttgggattgaacttctg
ccttggcacaagttggagttttgcaaagaaacaagttggtggagacaaataatagaaggt
tctattcgtgatatccccgagggtacactggagccactgatgagattgagatcatctcta
gagtgtcataaatgtgggtttgatgaggatgtagatgttcaagctgaaagacatagggtc
ctctctggtgctgctaaaaacagtataattcgcttatccaatctttgcaaggtgtattct
ggtggaaggcaagatttcgcaaaaattgctgttgataatttatgctttgctgttcaagaa
ggggaatgttttggcttccttggaacaaatggagctggaaaaacaacaacattgcgaatg
ctgtcaggtgaagaatgcccaactgatggaacagcatacatttttggtattgatattcgc
ataaaccccaaagctgcatgtcaaaatgttgggtactgcccccaatttgatgcactgcta
gaacttttgactgtccaagagcatcttgaactctatgcacgaatcaaaggtgtccctgga
aatagaatagatgatgttgtggaggagaagcttacagagtttgatctttggaaacaagct
aacaaaccatcatgttatttaagtgggggaaacaagaggaagctgtctgttgcaatagct
atgattggggatccaccgatagtcatattagatgagccatctgcaggtatggatccaatt
gccaaaaggttcatgtggaatgtgatctctcacttatctacacgccaaggaaaaacagct
gttcttctgacaacgcatagcatgagtgaagcacaagcactttgcacgagaattgggata
atggttggaggacgacttcaatgcattggaagcccacaacatctaaagactcgatttggc
aatcatcttgaattggaggtaaggccaaccgatgttactagatgtgagttggacaatctt
tgcagcaaaattcaagggcttctctctgattttccttgtcatccaaagggtgtccttcat
gatcttgaaatatgtattggagggaatgacttaattcttccggcagatgtttcagaaata
tgtctatcagaggaaatggtagcttttgttggacgtttccttgaaaatgaaagccgtgtt
aggactcttctgtctggaagattggctgctgatggtgtcttcagtcagcaattgtcagaa
cagcttgctcgtgatggtggtattccattaagaatattttcagagtggtggttggctgag
gagaaatattcactgattgattcttttatcctttccacgtttcatggagcaatatttcaa
gggctcagtggtcttaacatcaagtatcagttgccatatggagaggattcttctcttgct
gaaatctttggacacctggagcgaaataggagcaaacttggaatatcagagtacagtatc
agccaatccacattggagaccattttcaaccactttgctggaaactcataa
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integrated database retrieval system
