Nymphaea colorata (blue-petal water lily): 116256236
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Entry
116256236 CDS
T07418
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116256236
Enzymes [BR:
ncol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116256236
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
116256236
NCBI-ProteinID:
XP_031488394
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Position
6:1977395..1980334
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AA seq
437 aa
AA seq
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MEGLVRQIALPLILVAVIAISTADAHIAHHDDYWTQRAEEARQAALDTYHAEPFNITDQF
NAAVHEHEEAENSTRRHLAKYTGECVATNPIDRCWRCDKFWHLNRKKLANCALGFGRKAF
GGKRGKIYVVTDPSDDDLVNPKPGTLRYAAIQDRPLWIIFARDMIIRLSEELLINSNKTI
DGRGANVHIAYGAGLTIQFVKHVIIHGLHIHDIKAGNGGMIRDSETHFGLRTRSDGDGIS
IFGASNVWIDHNSMSNCMDGLVDAVEGSTGITISNNHFTNHNEVSLMGASDSYSPDSIMQ
VTFAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWQMYAVGGSQHPTIISEGNRYIAPELD
YAKEVTKRDYAPENVWSKWIWSSQQDYFLNGAFFRASGPTFKNRYSKAQKITAKNGTFVG
RLTRFAGALNCKPMVKC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtttggtccgccagatcgccctaccactgatcttggtcgcagtcatcgcgata
tcaacagccgatgcccacatcgctcaccatgacgactactggacccagcgagccgaggag
gcccggcaagccgcgcttgacacctaccacgctgagccctttaacatcaccgatcagttc
aacgcggccgtccacgagcatgaggaagctgagaatagcacgaggcggcacctggcaaag
tacacgggtgagtgcgtggccacgaacccgatcgaccggtgctggaggtgcgacaagttc
tggcacctgaaccggaagaagctcgccaactgcgccctagggttcggccggaaggcgttc
ggcgggaagcgcggaaagatctacgtcgtcaccgacccgtccgacgacgacctggtgaac
cccaagcccggcacgctccggtacgccgcgatccaagaccggccgctgtggatcattttt
gcccgcgacatgatcatccgtctcagcgaagaactcctcatcaacagcaacaagaccatc
gacggcaggggcgccaacgtgcacatcgcgtacggcgccggcctcaccatccagttcgtc
aagcatgtcatcatccatggcctccacatccatgacatcaaggccggaaatggcgggatg
atcagggactccgagacccatttcgggctgaggacgaggagcgacggcgatggcatctcc
atctttggagctagcaacgtttggatcgaccataactccatgtccaactgcatggatggc
cttgttgacgccgttgaagggtccacgggcatcaccatctccaacaatcacttcaccaac
cataatgaggtgagtctcatgggtgcaagtgacagctactcaccagattccatcatgcaa
gtaacctttgcattcaaccacttcggaagaggccttgtgcagcgcatgcccaggtgccgg
tggggattctttcatgtggtgaacaatgactacacccactggcagatgtatgcagttggt
ggaagccagcacccaacaatcataagtgaaggcaatcgctacattgccccagagcttgat
tatgccaaggaggtgacgaagagggactatgctccagagaacgtttggagcaagtggata
tggagctcgcagcaggactactttttgaacggagcgttctttagggcttcagggccgacg
ttcaagaaccgttactccaaggctcaaaagatcacggccaagaacggcacatttgtcggc
aggctcacacgcttcgccggcgcactcaactgcaaacctatggtgaaatgttga
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