Nymphaea colorata (blue-petal water lily): 116256239
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Entry
116256239 CDS
T07418
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03020
RNA polymerase
ncol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116256239
09124 Replication and repair
03420 Nucleotide excision repair
116256239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116256239
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116256239
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116256239
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116256239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
116256239
NCBI-ProteinID:
XP_031488398
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All DBs
Position
6:2822374..2825659
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AA seq
117 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPNVLFAG
YKLPHPLQYKILVRIHTSSQSSPMQAYNQAINDLDRELDYLKNAFQDEEQRHLRSSY
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccagaccgctacgagcgcttcgttgtgccggaggggaccaagaaagtatcg
tatgagagagataccaagatcatcaacgcagcatctttcacgattgagagggaggatcac
acgatcgggaatatcctcaggatgcagttgcacagagacccaaatgtcctttttgctgga
tacaagcttccacacccactgcagtacaagatcttagtcaggattcatacgtcaagccag
tcgtcaccgatgcaggcgtacaaccaggccattaatgatcttgatagggagcttgattac
ttgaagaatgcatttcaggatgaagaacaaaggcatctgagaagcagctactag
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