Nymphaea colorata (blue-petal water lily): 116256260
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Entry
116256260 CDS
T07418
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03082
ATP-dependent chromatin remodeling
ncol03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116256260
03083 Polycomb repressive complex
116256260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncol03036
]
116256260
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116256260
Histone modification proteins
HAT complexes
HATB complex
116256260
HDAC complexes
Sin3A-HDAC complex
116256260
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116256260
PRC2.2
116256260
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116256260
Heterochromatin formation proteins
Other heterochromatin formation proteins
116256260
Chromatin remodeling factors
NuRD complex
116256260
NuRF complex
116256260
NuRF complex (fruit fly)
116256260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
Beta-prop_HPS5
MIOS_WD40
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
RMC1_N
Motif
Other DBs
NCBI-GeneID:
116256260
NCBI-ProteinID:
XP_031488430
LinkDB
All DBs
Position
6:complement(24474735..24497275)
Genome browser
AA seq
424 aa
AA seq
DB search
MAKDDEGFRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDREEPPGKD
HSVQKMILGTHTSDNEPNYLMLAQVQLPLEDAESDARQYDDERGEVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHNTE
GYGLSWSTFKQGNLLSGSDDAQICLWDINATPKNKALEAQQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDRQLLIWDMRSSSANKPIQSVIAHQGEVNCLAFNPFNEWVVATGSTDRTVKL
FDLRKISTALHTFACHKDEVFQIGWSPKNETILASCCAGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPADES
AKTS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggacgacgaggggttccgcggggagatagaggagcggctgatcaacgaggag
tacaagatctggaaaaagaacacgccttttctctacgacctcgtgatcacccatgccctc
gagtggccttcccttaccgtccagtggctccccgacagagaggagccaccgggaaaggat
cattccgtgcagaagatgattctcggaacccacacctctgacaacgagcctaactatctt
atgctcgcccaggtccagctccctctcgaggatgcggagagcgacgctcgacagtacgac
gacgagcgcggcgaggtcggcggcttcggttgcgccaacgggaaggtccaaataattcag
caaatcaaccatgatggagaggttaatcgggctcgttacatgcctcaaaatcctttcatt
attgcaacaaagaccgttagtgcggaggtttatgtgttcgattatagcaaacacccctct
aagcctccactggatggtgcctgtaatccagatcttaggttaagaggtcacaatactgag
ggctatggtctatcctggagtacttttaagcagggtaatctgcttagtggttctgatgat
gcccagatatgtttgtgggatattaatgcaactccaaaaaataaagcgcttgaagctcaa
cagatcttcaaggtccatgaaggtgtcgttgaagatgttgcatggcacttgagacatgag
tatctgtttggttctgttggtgatgaccgccagctacttatctgggatatgcgttcatca
tcagccaacaagccaatccagtctgtcattgctcatcaaggtgaggtgaactgccttgct
tttaatccattcaatgagtgggtggttgcaactggatcaactgatagaactgttaagctt
tttgaccttcggaagatcagtactgcgttgcacacttttgcttgccacaaggatgaggtt
ttccagatcggatggagtccaaaaaatgaaactatacttgcgtcatgctgtgctggcaga
agacttatggtctgggacctcagcaggattgatgaagaacagacaccagaggatgcagag
gatggaccgccagagttactgtttattcatggagggcataccagtaagatctcagatttc
tcgtggaatccttgtgaagattgggtagttgctagtgttgcggaagacaacattcttcaa
atatggcagatggctgagaacatataccatgatgaagatgacttgccagctgatgagagc
gcaaaaacttcgtag
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