Nymphaea colorata (blue-petal water lily): 116256654
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Entry
116256654 CDS
T07418
Name
(RefSeq) THO complex subunit 4B-like isoform X1
KO
K12881
THO complex subunit 4
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03013
Nucleocytoplasmic transport
ncol03015
mRNA surveillance pathway
ncol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116256654
09122 Translation
03013 Nucleocytoplasmic transport
116256654
03015 mRNA surveillance pathway
116256654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116256654
03041 Spliceosome [BR:
ncol03041
]
116256654
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116256654
TREX complex
116256654
Spliceosome [BR:
ncol03041
]
Complex C
Other components
EJC/TREX
116256654
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116256654
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
RRM_10
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
116256654
NCBI-ProteinID:
XP_031488904
LinkDB
All DBs
Position
6:complement(886291..895588)
Genome browser
AA seq
250 aa
AA seq
DB search
MSSALDMSLDDLIKTNKKSGGGGGSNSRGRGRGGGGPGPARRLQNRAANRSLPYSVKAAP
ETAWQHDMYMDQAAPAAYPGLVARSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRFS
VHYDRSGRSKGTAEVVFSRRSDAIAAVKRYNNVQLDGKPMKIEIIGTNMSTPASIPQVTN
GLLGNPNGIPRSSQGREAAAARPRGGGGGSGRGLGRGRGRGRGRGRGEHVSAEELDAELD
KYHSEAMQTN
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgccttggacatgtctcttgatgaccttatcaagaccaacaagaagtccggc
ggtggcggcggaagtaattcgaggggaaggggccgcggaggaggtggtcctggtcccgcc
cgccgtcttcaaaaccgcgccgcgaatcggtcgctcccttattcggtcaaggcggcccct
gaaacggcgtggcagcatgacatgtatatggatcaggcagcaccggcagcgtacccaggc
ctggtggcccgatcgatcgaaacggggacgaagctttacatttcgaatttagattacggc
gtttccaatgaagatataaaggagcttttctcagaagtgggtgatttgaagcgattctct
gtccactatgacagaagtggcaggtcaaagggtactgccgaagtggtattttcaagaaga
tcagatgctatagcagctgttaaacgctacaacaatgtgcagcttgatggaaagccaatg
aaaattgagataattggaaccaatatgtcaactcctgcttcaataccacaagttacaaat
ggcttgttgggaaatcccaatggtattcccaggagcagccaaggaagagaagctgctgct
gctcgtcctagaggaggaggaggtggcagtggtcgtggactgggtagagggcgaggaagg
ggaaggggaagaggacgtggtgaacatgtatctgcagaagaacttgatgcagaattggat
aaatatcactcagaggcaatgcagacaaattga
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integrated database retrieval system
