Nymphaea colorata (blue-petal water lily): 116256689
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Entry
116256689 CDS
T07418
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116256689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116256689
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116256689
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
116256689
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
116256689
NCBI-ProteinID:
XP_031488960
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All DBs
Position
6:4414857..4418676
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AA seq
312 aa
AA seq
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MAKFSVGDEEEAGPSTNDGVDDIPDRKRRRTGETSADGEECGDVKDAGGGDADKIAERGE
GRGANRLISVAIDPDLLDCPICMEPLAPPIYQCWNGHITCSSCCLKLKKKCHTCFEVIGL
HRCLAMEKVVESIKINCCYARFGCLKSISYADKTKHEDSCIYAPYVCPIWNCTFCGTSEQ
ICFHFMSVHSVSTRCFRYNHSFTFTMDKTEECLVLHGDDGLLFLVNNRIDLLGNAVAVAL
ISPSCPRRDFAYDLIVRCRERSLRLQSFTRRVKQAPDLPSQDFLLIPHDAYLCDGQLKLE
ICIYSIPKEPSE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttctcggtaggcgacgaggaggaagcaggccccagcacgaacgacggcgtt
gatgatattcccgataggaaacgtcgaaggaccggggaaacatctgctgatggtgaggaa
tgcggcgacgttaaggatgctggtggtggagatgccgataaaattgcagaacgtggtgaa
ggaaggggggccaataggctcatctccgtcgccatagaccctgaccttctcgattgcccc
atttgtatggagccgttggctccacccatttaccagtgttggaatgggcatatcacctgc
tcctcgtgctgcttgaagctcaagaagaaatgtcacacttgctttgaggttatcggtctc
caccgctgtctcgccatggagaaagttgttgaatcaattaaaattaattgttgctatgca
cgctttggatgtttgaagtccataagttatgcagataaaacaaagcacgaggattcatgt
atttatgcaccctacgtttgccctatttggaactgcactttttgtggtacctctgaacag
atctgttttcatttcatgagtgttcactcagtttctacaagatgtttcagatacaaccac
agtttcactttcacaatggataaaacggaggagtgccttgtccttcatggggacgatgga
ctcctctttcttgtcaataacagaatagatctcttgggaaatgctgtggcagtggcctta
atcagtccaagctgcccaagacgtgattttgcatatgacttgattgttcggtgcagagag
agaagccttaggctacagtcgtttacaaggagagtaaaacaagcaccggatcttccatcc
caggattttctccttatccctcatgatgcttatttgtgcgatggacaactcaagttggag
atttgtatatatagtataccaaaggagcccagtgagtga
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