Nymphaea colorata (blue-petal water lily): 116256733
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Entry
116256733 CDS
T07418
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116256733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116256733
03036 Chromosome and associated proteins [BR:
ncol03036
]
116256733
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116256733
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116256733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
116256733
NCBI-ProteinID:
XP_031489053
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All DBs
Position
6:8594610..8607784
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AA seq
724 aa
AA seq
DB search
MPGRASDSSTALISFVPEVKDPVVYHLHHGLKSPPSSISVSWSRGNVLRVAFFRHHATPR
SGSDAERTVDEGSSGKVVELRFCSGDWEFDEARRRRVAYGSVHAFALLQSQRSVLSTSMM
APHRADWWKHVMEFSKCISELLGGARHSSLSIIENPRMLVKSSDEPTYSKAAWQLLEMFY
VDNHSFNWLPERFVDWLADYDRLISKTEMTIHSRLVALQNKLVNLQFVEDDPEYWEGIAS
ALTVGWLEMVVKLLRLHGSYQLDQLDNRETENGLVEAVAVLVSTMPRLRPDALSGGFGQC
LSTKPDFIKAWEKWRGQVAKLDCSGFWLRCEHRQTTDGLKRLLQILLGNVESLAAAACHW
MELFIAHILYIRPLTMGLEAMYSLTQKCIQLKPTSHDNNLMRLILGILGDNTEVVLAECL
RSFGPWMVAHAMELLTAKNHQIELLLHEERYNLGGISIEELHRLVYAQVLASHALTWQIA
PIYLASCPKQGLGLLEILLYRQPVQHNQLFLKTLEICNLYELGNIGASIMTIAGIHHWKH
GRKGLGVFWLQQAHDEVRLGKIAQQLFESVGKSLSDDSFRQWEGLVELLEHENRSAGGLE
FLHMYREFKRSLQKLQNELHAGIQDEILLDAARQALELLILLLKNPSTPQRFWLPLLHDS
LILLRWRDHSLLSVSQANLLLRKLQELSLAKLHPGFSEADLPPEALSNVRLALATSLGRA
MLRG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccggggagggcgtcggattcaagcacggcgttgatttcgttcgtacccgaggtgaag
gatccagtggtgtaccatctgcaccacggcctgaaaagccctccctcctcgatttccgtc
tcctggtcccgggggaacgtcctccgggttgccttctttcggcaccacgcaacccctcgg
tctggcagcgatgcggagagaacggtggatgaaggcagcagcgggaaggtcgtggagctc
cggttctgttcgggcgactgggaattcgacgaggctcggcggaggagggtcgcctacggc
tcggtgcacgcgtttgcgttgctgcagagccagaggagtgtcctttcgacttcgatgatg
gcgccccatcgcgcggactggtggaagcatgtgatggagttcagcaagtgcatcagtgag
ctgcttgggggtgcaaggcattcatctctttcgatcattgaaaacccaagaatgcttgtg
aagtcatctgatgaacctacgtattccaaggccgcatggcaattgttggagatgttctat
gttgataaccattccttcaactggcttcctgaacgatttgttgattggttagcagactat
gatcggctcatatcaaagacagagatgaccatccattccaggcttgtagctttgcagaac
aaacttgtcaatttacagtttgttgaggatgatcctgaatactgggaagggattgcttct
gcactaacagttggatggctggagatggtggtgaagctgttgaggttgcatggatcctat
cagttggatcagcttgataatcgtgagactgaaaacggactcgttgaggcagttgcggtt
cttgtttcaacaatgccacgcttgcgccctgatgcactgtctggaggctttggacaatgc
cttagtactaaacccgattttattaaggcatgggaaaagtggcggggacaagtagctaag
ctggattgcagtggcttttggcttaggtgtgaacatcgtcaaacaacagatgggttaaaa
agattattacaaattttgctgggtaatgttgaaagtcttgctgccgcagcatgccactgg
atggagttgtttatagcgcacattctttacatcaggccacttacaatgggcttagaggcg
atgtacagtttaacccagaagtgcattcagttgaaacccacatcccatgataacaacttg
atgaggcttattcttggaattcttggtgacaatacggaggttgttctagcagaatgctta
agatcctttggcccctggatggttgctcatgccatggaattgttgacagcaaagaatcat
caaattgaacttcttttgcatgaggaacgatataatttaggtggaattagcatagaggag
ctgcatcgacttgtttatgctcaagtcctggcttctcatgctttgacttggcaaattgct
ccaatttatttggcatcttgtcccaagcaaggtttagggctgctcgaaattttactatac
agacaacctgtgcagcataaccaactatttctgaagacccttgagatatgcaacctatat
gaacttggcaatattggtgcaagcatcatgacgattgcaggaatccatcactggaagcat
ggcaggaaggggttaggtgttttttggctgcaacaggctcatgatgaagttcgtctgggg
aaaattgcacagcagttgtttgaatctgtggggaagtcattatcagatgatagttttagg
caatgggaagggttggttgaacttcttgaacatgaaaacaggagtgccggaggtcttgaa
tttctgcacatgtatagagagttcaaaagatcgcttcaaaaacttcagaatgaactccat
gctggaattcaggatgaaatattgttggatgctgcacgacaagcattggagcttcttata
ctgctcctgaaaaatccatcaacaccacagcgtttttggttgcccctccttcatgattcg
ttgattttactacgctggcgagaccattccctgctttctgtctctcaagccaacctgttg
ctaagaaaacttcaagagttgtcattggcaaaattgcatccgggtttttctgaagctgat
ttgcccccagaggccttgagtaatgtcagattggcattggctacaagtctcggccgagca
atgcttcggggctga
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