Nymphaea colorata (blue-petal water lily): 116256774
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Entry
116256774 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116256774
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116256774
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncol01002
]
116256774
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116256774
03036 Chromosome and associated proteins [BR:
ncol03036
]
116256774
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116256774
Peptidases and inhibitors [BR:
ncol01002
]
Metallo peptidases
Family M67
116256774
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116256774
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
116256774
BRISC complex
116256774
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
116256774
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
116256774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
116256774
NCBI-ProteinID:
XP_031489113
LinkDB
All DBs
Position
6:4698022..4706033
Genome browser
AA seq
446 aa
AA seq
DB search
MSLTGVRMSEEVWLTCLTHALSTEKEEVMGLLLGDIQYGRNGSATALIWGASPQPRSDRR
KDRVETNPEQLAAASAQAERMSLATGKTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLD
SGFIGLIFSCFSEDAQKVGRIQVIAFQSLDGKQKSFSRSQNPNPTSGGPIINVESSWSSS
ESLSSASASARDESAFQDTSDSRNVTRSAKGAGKNISPSDLEEFFAHADVNQAGRGKLKS
EPLSPYTHNDTVQQTVDIDPMDMTAGMQEAMHRSNLDMSGAEYTRKEVPLQVVPSSSLLK
LDSPLTSFIDMQTMLFEEEKTAYNQAVSQCKWDGKIHPLAFIHHTSTYHASLCKLMEYCL
SPAIVSLQHQLKENDVRLSLLKEEAEALEIEALNRAGSPILSAAGSLTSGVRMLPSVGRE
QSASPERAANVRSPVGMTSSRSRRGY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgacgggagtgagaatgtctgaggaggtttggctaacgtgcctcactcatgca
ttgtctacggagaaggaggaagtcatgggccttcttcttggggacattcagtatggtaga
aacggtagtgcaacggctcttatatggggagcatcgccacagcctagatctgatcgtcgg
aaggatagagtggagacaaatcctgaacagttggcagccgcatcagctcaggctgaaaga
atgtccttggcaacagggaagacgacacgtgtaattggatggtatcactcacatcctcat
attacagttcttccatcccatgttgatgttcgaactcaggggatgtatcaacttctagat
tctggcttcattggcttgatattttcatgttttagcgaggatgcacagaaggtggggaga
atccaggttattgcttttcaatctttggatggtaagcaaaaaagcttttcaaggtctcaa
aatcctaatccaaccagtgggggcccgattataaatgtcgagtcatcttggagctcatca
gaaagtctgtcatcggcatctgcatctgcccgggatgaaagtgccttccaagatacttct
gattctcgaaatgtaactagaagtgctaagggtgctgggaagaatatttctccatcagat
ttggaggaattttttgctcatgcagatgtcaatcaagcagggaggggaaagctaaaatca
gagcctctctcaccttatacccacaatgacaccgtacaacaaacagttgatattgatcct
atggatatgaccgctggtatgcaagaggccatgcatcgctcaaatttagatatgagtggt
gctgagtacacgaggaaagaagttcctcttcaagttgttccaagctcttcacttctgaag
cttgattctcctttgacatcattcattgatatgcaaaccatgttgtttgaggaagaaaag
acagcatacaatcaagcagtttctcagtgcaaatgggacgggaagattcatcctcttgcc
ttcattcaccacacctcaacctaccatgcctcgttatgcaaattgatggagtactgtttg
agtcctgctattgtttcactacagcaccagttgaaggagaatgatgttaggctatcgttg
ctgaaggaggaagcagaggctttagagattgaagctttaaatcgagctggtagtcctatc
ctgagtgctgctgggtctttgacgagtggtgttcggatgctgccttcagttgggagggaa
caaagtgcttcacctgagcgtgctgctaatgttaggagccctgttggcatgacttctagt
cgaagtagaaggggttactag
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