Nymphaea colorata (blue-petal water lily): 116257260
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Entry
116257260 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116257260
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116257260
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116257260
Surveillance factors
Other surveillance factors
116257260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
116257260
NCBI-ProteinID:
XP_031489728
LinkDB
All DBs
Position
7:19026150..19036961
Genome browser
AA seq
1672 aa
AA seq
DB search
MAAGKIDLPDDLLGAKAPDEAWTARDGASGGHEQERTLLGFFDESKDQAASEVIPLSPQW
LYSRPNEGKPFLSAASVDARAAELQKEAWRLDNSQDKKDWRRNIAEIESGRRWREEERET
AALTRRERRKEGDSKTDRRIENASTREGTDGRPLPSSDRWYDVNARYSGHETRRDSKWSS
RWGPEEREKETRSEKKMEFDKDEPSNEKQSLPGNNRERETDSRDKWRPRHRLELHSTSSN
VNRAAPGFGLEKARSDGTNVGFAPGRGRSQSSGSQQLAGLSVSTPIGAPLLDASEARQGK
FGLSAKSFRYPRGKLLDIYRKRDIFATADTVSNGFREEVPQITEANPIEPLAFVSPDADE
EAVLEDIRKGKLVTSGVLHIPLRDRVGKYEPESGVRDPNVLGRNSTKANIFTEHDSFSMK
EKKVSTSVDGTGLDGLSLTASNTNESFPKYNDLGRSTDNKSAVDKDEENAVAISLQPSKP
SVSDTLLPPDIQGKLPSDENLVFDLPGFQETSVYVQEQISGGSDTKFSGGSYNPEDMSLF
YRDPQGVVQGPFLGVDIMSWFEQGFFGTDLPVCLSDAPEGTPFQELGDVMPHLKFKTISS
ADIGNEEGMADVQENGGSNSLNYSLSLLENSQTRPLFELEDRLQSKLSTHEVPIEAVYGG
SYDANSEATQSIHSNDRQSNRNIVAQSVDESLLPKRPVSGGGQLRKPTGSLLDPLEDLSE
RHLPSNESARNVGLNPILPASKGSMSHPLGLPWSEFEGSKQQLFQPSSMSASAGSAGYLA
NQEIGRDAAYVRQNPASGLDETVGDAWTHVAKRDGSVGINAVQGTLDSRRLLQMDENTGL
NAAVRETMDAHWSLQLEQEAHHLDLMDRLISQQLQKQQLRQHNSLSHPNMHFGGPNIELA
GSSVGHGFNSSRTSHGHSLSDIEHHLAKLQLQQQHQFELQQQHQLELQQQQHQLQLQQQQ
RHLQQQQLHQHQMHLQQQHLHHHQQSHILEHLLQRGMHDPGFGQHPVDLLRGNSAFDQLL
SRQHGSLQSGVQPTIDPSMRFPDPMMEQLLQAKLGQGSHRGQNNDLLQLLLQAKHEPKLS
PEEQFLLGMRQEQLAAQQFPLHSRHHQQVMEEERRIGGGWSIDESGQFIRTAPNLHQSVS
AGLSPLDLYQQHLQQKPMQPQKFMGFEQPNQLEQSLLLEEHLQRGMYGNNSLPFERLVSG
PHAASGVDADLANTLARIQGLDLQERQAQMHLAGQMGSFNQEIHPPNSRSLPSSFHDKRD
AMDGRWPGQNLPFSNLVQPGQQPDNWMEAHLQQLHLEKLLQQRNNEVNHISEEPVSNHLM
DLLHQKSHLPPEHSLGSGDIAFASSLGRQEPHWLYHEAASAHHSILQGQEHLGNSFAEEL
PSDHGLPMQENLVNGGPEEQAHGIGLGERATFDSHSLMEDEKVLSAAEGASQSFNTDLVA
ESLTDSMELLEAKEGKKGKKRGSRIKSSNKLDIEQIALDQGADHGELIIHTPARHTSFGS
SGAVSQRQDLGIDGVPDGRSATSLSRSLGDSIPRHQPSSQSLSANQVLPESKVKITSVNS
SSLSDGRRDAAGSPPKARPSEVPAASAKDMRSGFRRAASYGSDADVSQASFIDMLKKPVG
ETETNEGTEMASQAARSNKKKGKKGRQIDPALLGFKVSSNRIMMGEIHRLED
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggaaagatcgatctgccggatgatctccttggcgcgaaagctcctgacgag
gcgtggactgcgagagatggagcttctggaggacatgagcaagagagaacgttgcttggg
ttttttgatgagtcaaaagatcaagcagcatctgaggtcataccgttgtcaccacagtgg
ctctattcaaggcctaatgagggcaagcctttcctttctgcagcatcagtggatgctcgt
gctgctgaacttcaaaaagaggcttggcgtttggataactctcaggataagaaagattgg
agaaggaacatagctgagattgaaagtggccgtcgttggcgtgaagaggaaagagaaact
gctgcacttactcggagagagcgccgcaaagaaggagatagcaaaactgatcgtcgcata
gaaaatgcttcaacaagggaaggtactgatggaagaccccttccttcatcagataggtgg
tatgatgtgaatgcccgttattctggacatgaaacaaggcgtgacagcaaatggtcctct
agatggggtcctgaagagagagagaaggagacacgaagtgaaaaaaagatggagtttgac
aaagatgaaccttctaatgaaaagcagtctctccctggaaataaccgtgagcgagagact
gattcccgtgacaagtggaggccacgccaccgtctggaacttcactcaacaagttccaat
gttaatcgagctgctccagggtttggcttggagaaagcacggtctgatggtaccaatgtt
ggatttgcaccagggcgagggaggtctcaatcgagtggaagccagcagcttgctggtctg
tctgtttcaactcctattggtgccccactgttagatgcaagtgaagctaggcaagggaag
tttggtctgtctgccaagagctttcgttacccaagaggcaaactcctggacatttaccgg
aaacgtgatatctttgctactgccgatacagtctcaaatggctttcgtgaagaagttccc
caaattaccgaggctaatcctatagaacctttagcatttgtatcacctgatgcagatgag
gaggctgtcttagaagatatacggaagggaaaacttgttactagtggtgtgctacatatt
ccactcagagatagagtgggaaagtacgaacctgagtcaggtgtccgagatcccaatgtt
cttggcagaaattctacaaaggcaaacatatttacagaacatgactctttcagcatgaaa
gaaaagaaagtttctacatctgtggatgggactggccttgatggcttgagtttgacagct
agtaatacaaatgaaagttttcccaagtacaatgatttaggacgcagtaccgataataag
agtgctgtggacaaggatgaagaaaatgctgttgccatttctctccagccttcaaaacct
agtgtttcagatactctactaccaccagatatacagggcaaactaccaagtgatgaaaac
ttggtttttgatctaccgggtttccaggaaacttctgtctatgtgcaggaacagatatct
gggggtagtgatacgaagttctcaggtggaagctataaccctgaagatatgagtttattt
tacagggatccccagggtgttgtacaggggcctttccttggtgttgacattatgtcctgg
tttgaacaaggcttttttggcacagatttgcctgtatgcctttctgatgcccctgaagga
acaccttttcaggagctgggtgatgtcatgcctcatttgaaattcaaaacaatatccagt
gcagatattggaaatgaggaaggcatggcagatgtacaagaaaatggagggagcaatagc
ctcaactactctttgtctcttcttgaaaacagccagacaaggccactttttgaactggag
gaccgtctgcagtcaaaattatctacacacgaagtgccaatagaagctgtttatggtggt
tcatatgatgctaattctgaagctacacaaagcattcatagcaatgacaggcaaagcaat
cgcaatattgttgcacaaagtgttgacgaatcattacttcctaagcgaccagtaagtggt
ggaggacaattgagaaagccaactggaagtcttcttgatcctttagaagatctatcggaa
agacatttaccatcaaatgaatcagcaagaaatgttggcctgaacccaatcttacctgct
tcgaaaggcagcatgtcacacccacttggtttgccatggtctgaatttgaagggtctaaa
caacaacttttccagccatcaagcatgtcagctagtgctggaagtgctggttaccttgca
aatcaagagattggaagagatgcagcttatgttaggcagaatcctgcttcgggccttgat
gagactgttggagatgcatggactcatgttgccaaaagagatggaagtgtggggattaat
gctgttcaaggcactttggattctcgccgcttgttacaaatggatgaaaatacaggcctt
aatgctgctgttcgtgaaactatggatgctcattggtcattacaacttgaacaggaagcc
catcatttggaccttatggaccgattgatctcacaacagctgcaaaagcagcagctccgg
caacataacagcttgtctcatccaaatatgcattttggagggccaaatatagagttggcg
ggttcatctgttggtcatggattcaattcttctcggacatcacatggtcactctttgtct
gatattgagcatcatttggctaaacttcagcttcaacagcagcaccaatttgagctccaa
cagcagcatcaattggagcttcaacaacagcagcatcaattgcagctccaacaacagcag
cgccacttgcagcagcaacagctccaccaacaccaaatgcatctgcagcaacagcatctt
caccaccatcagcagtcccatatacttgaacatcttctacagcgaggtatgcatgaccca
ggttttgggcagcatccagttgatctactgagaggtaacagtgcatttgaccaattgctg
tctcggcaacatggtagccttcaatctggtgttcaacctacaatagatccatctatgcga
ttccctgatcctatgatggagcagcttcttcaagcaaaacttggtcagggctctcaccgt
ggacaaaacaacgacctacttcagctattgttacaggcaaagcatgagccaaagctgtct
cctgaagagcaatttctcttgggaatgcgtcaggagcaactggccgcacagcagtttcct
ctgcattccaggcaccatcagcaggttatggaagaagagagacggattggaggcggttgg
tctattgatgaatcaggtcagtttatcaggactgcgccgaacctgcatcagtctgtatca
gctggattaagtccactggatctttatcaacagcatctacagcaaaaacctatgcagcca
caaaaatttatgggatttgagcaaccaaaccagcttgaacagagccttctactagaagag
cacctgcagcgtgggatgtatggcaacaactcactgccttttgagagactggtctctggc
ccacatgctgcttctggtgtggatgctgatttggcaaacactcttgctcgtattcaaggt
cttgatttacaggagaggcaggctcaaatgcaccttgcaggtcagatgggttcatttaat
caagaaattcaccctccaaattctcgatcccttcctagttcattccacgataagagagat
gctatggatggccgttggcctggacagaacttgccatttagcaatctggtgcagcctggg
cagcaaccagataactggatggaagcacatctccagcaattgcatctagaaaaattgctg
cagcaaagaaataatgaagtcaatcacatcagtgaggaaccagtatcaaatcacctgatg
gatttgctgcatcagaagtcacatcttcctcccgagcattcattggggtctggtgatatt
gcctttgcttcttctcttggaagacaagagccgcattggctttaccatgaagctgcttca
gcccatcattcaatccttcaaggccaggagcatcttgggaactcttttgcagaagagttg
ccttctgatcatgggctgccaatgcaggaaaatttggttaatggaggtcctgaagagcaa
gcacatggtattggacttggtgaaagagcgacatttgactctcattctttgatggaggac
gaaaaggtcttgtctgctgctgaaggtgcatcccagagttttaatacagatctagttgca
gagtcactgaccgacagtatggaacttctagaagcaaaggaggggaagaagggaaagaag
cggggatccaggattaagtcttccaacaagttggatattgaacaaatcgctcttgatcaa
ggggcagatcatggggaattgataattcacactcctgctaggcatacttccttcggtagc
tctggtgcagtctcgcagcgccaggatctgggtattgatggggtccctgatgggaggtcg
gcgacatccttgtcaagaagtcttggcgactccattccaagacaccaacctagctcacaa
tctttgtcagctaaccaagtgttgcctgaatccaaagtgaaaattacgtctgtgaactca
tcatcactgtcagatggaagacgagatgctgctggaagcccaccaaaggcacggccatct
gaagtcccggctgcgagcgctaaagacatgcgcagtggtttccggagagctgcttcctat
ggcagcgatgcggatgtttctcaggcatctttcatagacatgctgaagaagccagtggga
gaaactgagaccaatgaggggaccgaaatggcttctcaggcggcccgaagcaacaagaag
aaaggtaagaaaggaaggcagatagacccagctcttcttggcttcaaggtatcaagcaat
cggatcatgatgggcgagattcatcgcctggaggattaa
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