Nymphaea colorata (blue-petal water lily): 116257364
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Entry
116257364 CDS
T07418
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116257364
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116257364
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
116257364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
DExH14_plug
Helicase_C
AAA_19
AAA_30
DEXQc_Suv3
IstB_IS21
SWI2_SNF2
Sin3a_C
Helicase_PWI
TfoX_C
Motif
Other DBs
NCBI-GeneID:
116257364
NCBI-ProteinID:
XP_031489867
LinkDB
All DBs
Position
7:complement(12939344..13061696)
Genome browser
AA seq
2090 aa
AA seq
DB search
MKVQLPRLTTSLRDNYDVDRAYVERKWTLRDLERLRLRTNDSQYRRKILCKWDEDHPVDA
ASDDVKQAYRQFLGAVIELTNGETDAEELKEVMRATYAIFSASDTDYDRNKWILEKKGML
QTLLGFTPSNASIENIALLVQKLSTLQSTNFENTFSQEDQSAGLCDLTDEFGIGLDFQAP
KRFQVESVFSDALSPIEVQSSHSLLLLEEENDQFNFPQREGNVSLYWLKEACDNIVKNGC
SNLSGDELAMALCRVLESNKAGDEIAGDLLDLVGDSAFETVQELLLHRKELVDSIHHGIL
VLKAEKANAGAQPKMPSYGTQVTIQTEYGKQIDKLRRKEEKKQKRNSERGAENDQLSAVG
SFSSLLQASERKKPCDDFIGMGEDNSLPITALPQGTTRNYCKGYEEVIIPPAPTAQMKPG
ERLIEISELDDFAQAAFHGYKSLNRIQSHIFQAAYRTNENILVCAPTGAGKTNIAMIAIL
HEIRQHFKDGFLHKSEFKIVYVAPMKALAAEVASTFSNRLLPLNMTVKELTGDMQLSKNE
LEETQMIVTTPEKWDVITRKSSDMSMSMLVKLLIIDEVHLLNDERGPVIEALVARTLRQV
ESTQSMIRIVGLSATLPNYLQVAQFLRVNCETGLFFFDSSYRPVPLAQCYIGISERNFIT
RYQLLNEICHNKVVESLKNGHQVMVFVHSRKDTGKTARTLVEFAQRNDELSLFQSNEHPQ
FSLIKKEVQKSRNRELVELFDSGFGIHHAGMLRADRSLTERLFSDGLLKVLVCTATLAWG
VNLPAHTVVIKGTQLYDPKAGGWRELGMLDVMQIFGRAGRPQFDKSGEGIIITTHDRLAY
YLRLLTNQLPIESQFVSSLKDNMNAEVVLGTVTNVREACAWLGYTYLFIRMRTNPLAYGV
GWEEVIADPLLLSKQRSLIIDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIRYSSV
ETYNEMLRRHMNDSEIITMVSHSSEFENIAVREEEQQELETLVRTSCPLEVRGGPGDKYG
KISILIQVFISRGSLDSFSLVADAAYISASLARIMRGLFEICLRRGWSEMSSLLLGYCKA
VDRQIWPHQHPLRQFDKDISQDILRRLEDRDADLDHLHELDEKDIGALIHYFPGGKIIKQ
YLPYFPWVHLSATVSPITRTVLKVDLLITPDFLWKDRFHGAAERWWILVEDSENDHIYHS
ELFTLTKKMARGGPQKINFTVPLFEPHPAQYYIRAVSDSWLQSEAIHAISFLNLTLPEAD
TLHTELLDLKPLPVTSLGNEIYEQLFKFSHFNPIQTQVFHVLYHTDQSVLLGAPTGSGKT
ICAELAIFHLFNMQPDMKVVYIAPLKAIVRERMNEWQNRLVSVLGKKMVEMTGDFTPDLM
ALLSADIIISTPEKWDGISRNWHIRTYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYI
SSQTERAVRFVGLSTALANARDLADWLGVSDMGLFNFKPSVRPVPLEVHIQGYPGKFYCP
RMNGMNKPSYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDERPRQFLNMPEEEL
QMVLVQVKDLSLRHTLQFGIGLHHAGLNDKDRALVEEMFGNNRIQVLVSTSTLAWGVNLP
AHLVIIKGTEFYDGKAKRYVDFPITDILQMMGRAGRPQYDQQGKAVILVHEPKKSFYKKF
LYEPFPVESSLKDQLHDNINAEIVSGTICNKEDAVYYLTWTYLFRRLVVNPAYYGLEDAD
TRTVNSYLSRLVQNTLEDLEDSGCIKINENNVEPLMLGTVASQYYLSYMTVSMFGSNIGP
DTSLEVFLHILSGATEYDELPVRHNEENINKTLTEKVRYLVDEQCLDDPHVKANLLFQSH
FSQLELPISDYVTDMKSVLDQSIRIIQAMIDICANSGWLSSAITCMHLLQMVMQGLWFDQ
DSPLLMLPCMSSDLLRFLNKVGINSIQQLVELGKMNLQKMVSSFPSASLIVQEIELFPFL
QVRIKLERNVKDGSRPSILIVKLESLNSRRKTTRAFAPRFPKIKEEAWWLILCNDATSEL
YTLKRVSLSKHVVTRMNFPSEPSNLKGMKLILMSDCYLGYELEYPIEELI
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttcagcttcctcgccttactacttcactcagagataactacgacgtcgatcgt
gcctacgtcgaaagaaaatggacccttcgggacctcgaacgactccggttaaggacaaat
gattctcaatatcgacgtaaaatcctctgcaaatgggatgaagatcatcctgttgatgca
gcctctgatgatgtcaaacaagcttacagacaatttcttggagcagtaattgagttgacc
aatggtgagacagatgctgaggaattaaaagaggtcatgagagcaacttatgcgatcttc
tctgcatcagacactgattatgatagaaataagtggattttggagaaaaaggggatgttg
cagacacttttgggatttacaccttctaacgcgagcattgaaaacatagccttgctagtg
cagaagctttctacgttgcagtcaactaattttgagaatacatttagtcaggaagaccag
tcagctggactttgtgaccttactgatgaatttggcattggcttggattttcaagcaccc
aaaaggtttcaagttgagtcagtcttttcagatgctttatcgccaatcgaagtgcaatca
agtcattcgcttttacttcttgaggaagagaatgaccagttcaattttccacaaagagaa
ggaaatgtgagcttatattggttgaaagaagcatgtgataacatagtcaagaacggctgt
tctaatctttctggggatgaattagcaatggccctttgtcgagtacttgagtctaataaa
gcaggcgatgagatagctggggacctgttagatcttgttggtgacagcgcatttgaaacg
gttcaagaactattgttgcatcgaaaggagctagttgattccattcatcatggcatcctt
gttttaaaagccgagaaagcaaatgcaggtgctcaaccaaagatgcctagctatggcaca
caagtcactattcagacagagtatggaaaacaaatagacaaacttcgccgcaaagaagag
aaaaagcagaaacgaaattcagaacgtggtgctgagaatgaccaattatctgcagttgga
agcttttcatctttactacaagccagtgaaaggaaaaagccttgtgatgattttattggg
atgggagaagataacagcttacctattactgcccttcctcaagggacaactagaaattac
tgtaagggttacgaagaagtcataatacccccagctccaacagctcagatgaagcctggg
gagaggctgattgaaatttcagaattagatgattttgctcaagctgcatttcatggttat
aaaagcctcaaccgcattcagagccacatatttcaagcagcatatcgcacaaatgagaac
atacttgtttgtgcaccaactggagctgggaagaccaatatagcaatgattgctattttg
catgaaatcaggcaacattttaaggatgggtttttgcataagtctgaattcaaaattgtt
tatgttgctccaatgaaggctttagctgctgaggtggcctcaacctttagtaatcgcttg
cttcctttgaatatgactgtaaaagaacttacgggtgacatgcagctttccaagaatgaa
cttgaagagacacagatgattgttacaacacctgaaaaatgggatgtgattactcggaaa
agcagtgatatgtcaatgtcaatgcttgtcaaacttttaatcattgatgaagtacatttg
ctgaatgatgagagaggtcctgtaatagaggcattagttgctcgaacacttcgtcaggtt
gagtcaacgcaaagtatgatccgaattgtcggtctctcagctacactgccaaattaccta
caggtggcacaatttttaagggtcaattgtgagacagggttattctttttcgactctagc
taccggccggtgcctcttgcgcaatgctatattggaataagtgaacgtaattttatcact
cgatatcaattgctgaatgagatatgtcataacaaggttgtggagtcattgaagaatggg
catcaggtgatggtatttgtccactcgagaaaagacactgggaagacagcgaggactttg
gttgaatttgcccagaggaatgatgaactgtcattattccagagtaatgagcatccacaa
ttttctttaataaagaaagaagtacagaagtccagaaatagagaacttgttgagctgttc
gattctggttttggcattcaccatgctggaatgttgcgtgctgatagaagtctgactgag
cgactattctctgatggcctcttgaaggttttggtttgcactgcaacattggcctgggga
gttaacctacctgctcatacagttgtgataaaggggacccagctatatgatccaaaagct
gggggatggcgagaactggggatgcttgatgttatgcagatttttggtcgtgctggccga
ccacaatttgacaaaagtggtgaaggaattattatcacaacacatgataggttggcctac
tatttgcgactcttgaccaaccagcttccaatagaaagtcagtttgtgagttctttgaag
gataacatgaatgcagaggtggtcttaggcactgttacaaatgttagggaggcttgtgct
tggcttggatatacatatcttttcatcagaatgagaactaaccctcttgcatatggtgta
gggtgggaagaggtcattgctgatcctttgttgctttccaagcaaaggtctctgataata
gatgcagcacgtgctcttgataaggccaaaatgatgaggtttgatgagaagagtggaaat
ttttattgcaccgagcttggtcgtatagcaagccatttttatattcgatattctagtgtt
gagacatacaatgaaatgttgaggcgccatatgaatgatagcgagataattacaatggtg
tcacattcttctgagtttgagaacattgctgttagagaagaagagcaacaagaattggaa
acattagttagaacatcatgtccattagaagttcgaggtggacctggtgataaatatggg
aagatctctatcctcatccaggtttttatatcaagggggtcgttggatagtttttccttg
gttgcagatgctgcatatattagtgcaagcctggcccgtattatgcgtggcctttttgaa
atttgtctgcggcgcggctggagtgaaatgtcttctcttttgttgggatattgcaaagct
gttgatcgccagatttggcctcaccaacatccgcttaggcagtttgacaaagacatttca
caagatatattgaggagacttgaagatagagatgcagacctggaccatctccatgaattg
gatgaaaaggacattggtgctttaatccattactttcctgggggaaagatcatcaaacaa
taccttccatatttcccatgggtgcatttgtctgctaccgtgagtccaattaccaggaca
gttttgaaggttgatttgcttataacacctgatttcctatggaaggatcgttttcatggt
gctgctgaaaggtggtggattcttgtcgaggactctgagaatgaccacatttatcattct
gagctcttcacattgaccaagaagatggcaagaggaggacctcagaagatcaattttaca
gtgccactttttgaaccacatcctgcccagtattacattcgtgctgtttcagattcttgg
ttacagtctgaggccattcacgctatttcttttctgaatcttactctacctgaggcagat
acgttacacacagagttgcttgatctgaaacctctacctgtaacttcccttggaaatgag
atttacgagcaactattcaaattctcacactttaaccccatccagacgcaggtttttcat
gtactttaccacacagaccagagtgttttgttaggtgctcctactggaagtgggaaaact
atatgtgcagaacttgcaatctttcatctctttaacatgcaacctgatatgaaggtggtc
tacattgctcccttgaaagctattgtccgtgagagaatgaacgagtggcaaaataggctt
gtttctgtccttgggaaaaagatggttgaaatgacaggggattttacaccagacctgatg
gctttactgtcggcagatatcattatttctacaccagagaaatgggatgggattagccgt
aattggcatataaggacctatgtcatgaaggtagggctgatgatattggatgagatccac
ttgcttggtgctgatcgtgggcctattcttgaggtaattgtctcaagaatgagatacata
tcctcacaaacagagcgtgctgtaagatttgtagggctttctactgcattagccaatgca
cgtgatctggcagattggcttggcgttagtgatatggggctgtttaatttcaagcctagt
gtcaggcctgtgcctcttgaagttcacattcaggggtaccctgggaaattttattgtcca
cggatgaatggcatgaataaaccttcttatgcagccatttgtactcactcacctaccaaa
cctgttcttatatttgtgtcatcccgccgtcaaacgaggctgacggcactagatctcatt
cagtttgctgcttctgatgagcggccgaggcagttcttgaatatgccagaggaagagctg
cagatggtccttgttcaggttaaggatcttagtttaaggcatactttgcagtttggcatt
ggtttgcaccatgctggtttaaatgataaagatagagctttggttgaggagatgttcggg
aacaacaggatccaggtcttggtcagtacaagcactctagcatggggcgtgaatctgcca
gcacatctggtgataataaagggaactgaattctatgatgggaaggcaaagagatatgtt
gacttcccaattacagatatcttgcaaatgatgggccgtgcaggtcgaccacagtatgat
cagcaaggaaaggctgtcattcttgttcatgagccaaaaaagagtttctacaaaaagttc
ttatatgagccatttccagtggagagcagtctgaaggaccagttgcacgataatatcaat
gctgagattgtttctggtaccatctgtaataaagaagatgctgtgtattatctcacatgg
acttatttgttccggcgtttggtggtgaatcctgcttattatggattggaggacgctgat
accagaactgtgaattcttatttatcaaggttggtgcagaatacattggaggatttggaa
gatagtggatgcataaagattaatgagaacaatgttgaacctttaatgttgggaaccgta
gcttctcaatattatcttagttacatgacagtgtcgatgtttggatcaaacattggacca
gatacttctcttgaagttttcttgcacattctttctggtgcaacagaatatgatgagctc
ccagtgaggcacaatgaggagaatattaacaaaacattaacagaaaaagttcgatatctt
gtggatgagcaatgccttgatgatccacatgtcaaagcaaatctgcttttccagtctcac
ttttcacagttagagttgccaatctcggactacgttacagacatgaaatcagttttggat
caaagcatacggattatccaagctatgatcgacatttgtgcaaacagtggctggctttca
agtgcaatcacatgcatgcatcttctacagatggttatgcagggactgtggtttgatcaa
gattcgccactgctaatgcttccgtgcatgagtagtgatcttctaaggttcctcaataaa
gtaggtattaacagcatccaacaattagtagagctcgggaagatgaatttgcagaaaatg
gtttccagttttccatctgcttctctcatagttcaggaaatagagcttttcccttttctt
caagtgagaataaagcttgagagaaatgtcaaggatggttccagaccatcaattcttatt
gtcaaattagaaagcctgaattctcggcggaaaaccacaagagcctttgccccacgtttt
ccaaagataaaagaagaagcatggtggttgatactatgcaatgatgcgacctcagaacta
tacactctaaagagagtgagtttgtcaaagcatgtggtgactcgcatgaattttccgtca
gaaccatccaatctaaagggaatgaagctcattctaatgtcagattgttacttaggttat
gaactggagtatcctattgaagaactcatctaa
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integrated database retrieval system
