Nymphaea colorata (blue-petal water lily): 116257421
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Entry
116257421 CDS
T07418
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03018
RNA degradation
ncol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116257421
09123 Folding, sorting and degradation
03018 RNA degradation
116257421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116257421
03041 Spliceosome [BR:
ncol03041
]
116257421
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116257421
mRNA degradation factors
5'-3' decay
Lsm complex
116257421
Spliceosome [BR:
ncol03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
116257421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
116257421
NCBI-ProteinID:
XP_031490011
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All DBs
Position
1:complement(23968023..23981355)
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVVGTLKGYDQLLNLVLDGAVEFLRDPDDPLKT
TDQTRPLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagaaaagaaacagttctagacttggcaaagtttgttgacaaaggtgtccag
gtcaagcttactggcggaagacaagttgtgggcactttgaaagggtatgatcagctgcta
aaccttgtgctggatggagcagttgagttcttgcgagatccagatgatcctttgaagacg
accgatcaaactaggccacttgggcttattgtttgccggggaacggctgttatgctcgtg
tctccgacagatggaacagatgaaatagccaatccctttatccaaccagacggagcttaa
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