Nymphaea colorata (blue-petal water lily): 116257482
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Entry
116257482 CDS
T07418
Name
(RefSeq) cyclin-H1-1 isoform X2
KO
K06634
cyclin H
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03022
Basal transcription factors
ncol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116257482
09124 Replication and repair
03420 Nucleotide excision repair
116257482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116257482
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116257482
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116257482
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116257482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
Motif
Other DBs
NCBI-GeneID:
116257482
NCBI-ProteinID:
XP_031490128
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All DBs
Position
7:complement(10539629..10600650)
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AA seq
358 aa
AA seq
DB search
MAGEWRQHPFSPAVKKTSPEPSKKRQERVRMADFRTSTHKAQWIFTHHELAEKHQATNQR
AVRTLEQYGATRLEVDIDGSISYPEQQVDSRENGHNLPDPLTVEEEQLIRIFYEQKIQEV
CGAFGFPHKIQATAIIYFKRFYLQWSVMEHDPKHIMLTCVYASCKVEEFHVSAEELGKGI
QQDHQVILNNEMIVLQSLGFDLIVYAPYRSIDGFLEDMEECCRAMDGQRQFKDLRDPARL
EVDKIMLTDAPLLFPPAQLALAALRKSNEVLKVLDFDRYLDNIFSRQHEQSCYELDETLN
AIESLMKDVKIPAAKEMRHIDRKLKCCWNPSLQEESKRREKKSKHKSKRTAAEMQGAR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggctggagagtggcggcagcatcccttttcaccggcagtgaagaagacttcaccagaa
ccgtccaagaaaagacaagaaagagtcaggatggcggatttccggacctctacacacaaa
gctcagtggatattcacacatcatgaactggcagagaagcaccaagcaactaatcaaaga
gctgtgaggacccttgaacaatatggagccactcggttggaagtggatattgatgggtct
atttcatatccagaacaacaagttgattcaagggaaaatgggcataatcttcctgatcct
ctcactgtggaagaagaacaacttatacgtatattttacgagcaaaaaattcaggaagtt
tgcggtgcttttggattcccacacaaaattcaggctacagctattatatactttaaaaga
ttctatttgcagtggtcagtaatggagcacgacccaaagcacatcatgttgacttgtgta
tatgcgtcttgcaaagttgaagaatttcatgtatctgcagaggaacttggcaaaggaatt
cagcaagatcatcaagttattcttaacaatgaaatgatagttttgcagagtttgggattt
gatcttattgtatatgcaccctatcgttctattgatggctttctcgaggacatggaggag
tgttgccgagcaatggatggtcagcgccaatttaaggatctaagggatcctgcaaggctg
gaggtcgacaaaattatgctgacagatgcacccctcttgttcccgcctgcacagttggca
ctggctgctttgcgtaaatcaaatgaagtgcttaaagttctggactttgacagatatttg
gacaacattttttctcggcaacatgaacagagttgctatgaactagacgaaactcttaat
gccattgagtcattgatgaaagatgtaaagatccctgctgcaaaggagatgaggcatatt
gacaggaaactgaaatgctgttggaatcctagtttgcaggaagagagcaagaggagagaa
aagaaatctaagcataagtccaaaagaacggcagctgaaatgcaaggggctcggtag
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