Nymphaea colorata (blue-petal water lily): 116257499
Help
Entry
116257499 CDS
T07418
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116257499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116257499
03041 Spliceosome [BR:
ncol03041
]
116257499
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116257499
Spliceosome [BR:
ncol03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116257499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
EIF3I
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Ge1_WD40
Beta-prop_EML
PQQ_3
Beta-prop_WDR11_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
116257499
NCBI-ProteinID:
XP_031490186
LinkDB
All DBs
Position
1:27279385..27294839
Genome browser
AA seq
377 aa
AA seq
DB search
MGDLTDWDEEGYREAILRERQALTLTLFRSIFPPSRLSSDPDVLVAASSDGSLATYSVAS
AISGHSMHSNVTDYRLDEFIVSEPQSFIKAHNGPVYDVKFFGDNEDSLLLSCGDDGHIRG
WKWKKILNVEAPLSMKGHHLSPSFDLVSPQHRGPWNALSPIPEVNSVATDIQGGRLFAAA
GDSCAYCWDVETGTRTMTFTGHKDYLHCVIFRNTTNQIITGSEDGTAKLWDCRSGKCAQT
IDPSTSLLTQKGTKRDFSWISCIAIDSSENWLVCGGGDCLSLWSLPSSECILRFETHFPI
QDAIFDNNQVLAVGASPLLTRYNIDGKILSQIQCAPQSAFSVSLHPSGIVAVGGYGGLVD
IISEFGSHLCAFRCQVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatctgacggattgggacgaggaaggatacagagaagccatcctgcgcgagagg
caagccttaaccctgacgctcttccgctcaatcttccctccgtccaggctctcttccgat
ccagacgtcctcgtcgccgcctctagcgatggttccctcgccacctactccgtcgcttcc
gctatctccggacactcgatgcattccaacgtgaccgattatcggcttgacgaattcata
gtctcagagccacagtcattcatcaaggcccataacggacccgtgtacgatgtcaaattc
ttcggcgataacgaggattcgttgttgctgagttgtggagatgatggacacataagaggg
tggaagtggaagaaaattctaaatgttgaggctcctttgtctatgaaagggcaccatttg
agcccttcatttgatttggtgagccctcaacacagagggccctggaatgcactttcacca
attccagaagtcaattctgttgctactgatatacaaggtgggcgcctttttgcagcagct
ggtgattcatgtgcctattgttgggacgtggaaacaggtacaagaacaatgacttttact
ggtcataaagattatttgcattgtgtcattttccggaacacaactaatcagatcataact
ggttctgaagatgggacagcgaagctatgggactgtagaagtggtaaatgtgcacaaacc
atagatccatcgacaagcttgctcacacagaagggaactaagagagatttctcatggatt
agctgcatagctattgatagtagtgaaaactggttggtttgtggaggtggtgactgttta
tccctttggagccttccatcttctgaatgtattttaagatttgaaacacatttcccaatt
caagatgcaatatttgataataatcaggttttggcagttggggccagtcctttgttaact
cgttacaacattgatgggaagattctctcacagatacaatgtgctcctcaatcagcattt
tctgtttcattgcatccttcgggtattgtggctgttggaggctatggaggattagtggat
atcatttcagagtttgggagtcatttatgtgcttttcgctgccaggttatctaa
DBGET
integrated database retrieval system
