Nymphaea colorata (blue-petal water lily): 116257815
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Entry
116257815 CDS
T07418
Name
(RefSeq) DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03440
Homologous recombination
ncol03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116257815
03460 Fanconi anemia pathway
116257815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116257815
04121 Ubiquitin system [BR:
ncol04121
]
116257815
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116257815
Membrane trafficking [BR:
ncol04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116257815
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116257815
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
116257815
RecA family proteins
116257815
FA (Fanconi anemia) pathway
Other FA pathway factors
116257815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
AAA_22
DnaB_C
AF1548-like_C
Motif
Other DBs
NCBI-GeneID:
116257815
NCBI-ProteinID:
XP_031490669
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All DBs
Position
7:complement(21423261..21427994)
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AA seq
342 aa
AA seq
DB search
MEQQHRRHEKAVEEEHEAEDMQHGPFPVEQLQASGIAAVDVKKLKDAGLCTVEAVVYSPR
KELLHIKGISEAKVDKIIEAASKLVPLGFTSASQMHAQRLEIIKLTSGSRELDKVLEGGI
ETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPERLLQIAER
FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE
LSARQMHLAKFLRSLQKIADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIIAHAST
TRLALRKGRGEERICKVISSPCLAEAEARFQISTEGVTDVKD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagcatcgcaggcatgagaaagcggtggaggaggagcacgaggctgaggat
atgcagcatggtcccttccccgtcgagcagcttcaggcatctggaattgctgctgttgat
gttaaaaagctcaaagatgcgggcctttgtacagtggaagctgtggtctattcaccaagg
aaggaacttttgcatatcaaagggatcagtgaggcaaaagttgacaagattattgaagca
gcatccaagttggtcccactgggattcaccagtgctagccagatgcatgctcaacggctt
gaaatcattaagttaacttctggttccagagaacttgataaggttttagagggtggaatt
gaaacgggttcaattactgagatctatggggaatttcgttcaggaaaaactcagttatgt
cacacattgtgtgtaacttgccaactccctttggatcaaggaggtggtgaaggaaaagcg
atgtacattgatgcagaaggtacatttaggccagagcggctcttacaaattgcggaaaga
tttggattaaatggtgctgatgtgttggaaaatgtcgcttatgctagagcctataatact
gatcatcaatcaaggcttcttctagaagcagcctcaatgatggtggaaaccaggtttgct
ctcatgattgtggatagtgccacagctctatacaggacagatttttcaggaagaggagaa
ctctcagcaaggcaaatgcatcttgctaagtttctcagaagcctgcagaagatcgctgat
gagtttggtgtagcagtcgtgataactaatcaggtcgttgcacaagtggatggatctgct
atatttgcggggccccaaatcaagcccattggtggcaacattattgcgcatgcttctacc
acgaggcttgctctacgcaaggggaggggagaagagcgcatctgtaaagtaataagctca
ccatgcttagctgaggctgaagcacgttttcagatctccacggaaggagtgactgatgtt
aaggactga
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