Nymphaea colorata (blue-petal water lily): 116257898
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Entry
116257898 CDS
T07418
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116257898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116257898
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116257898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
116257898
NCBI-ProteinID:
XP_031490774
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Position
7:complement(20548394..20551996)
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AA seq
475 aa
AA seq
DB search
MQVMESDLGKLFIGGISWETNEDRLKEYFKTYGEVVEAVIMKDRTTGRARGFGFVVFADP
AVADRVVLEKHMIDGRTVEAKKAVPRDDQHTLNRSLGNIHGSASPARTKKIFVGGLASTV
TETDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLLKTFHELNGKMVE
VKRAVPKELSPGPSRSPLGGFGYGLNRVSNILNGYNQGYNPNSLGGYQMRVDGRFSPLPV
SRTGYSPFGPPSYGLGANFGPSLSPSYSGSSYSSSLNYNRGLNAYYNGNSSRYNNPIGYT
GSNGVAGSFFNTSGRNVWGSAGLNSTSAGSVDYATSGNGNFGVSGATWGLSPSASVQSGG
NGSGYAGGMLGYANSESSYGLGGSSFAGRSSGNSISQASYGASNGGYDGSYADLYGSSSV
YGDPTWRSETSEPDGSSSFGYGLGNSAGDATTKVSESYLAGYNVTNRQSNRGVAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcatggaatcagatctaggaaaattgtttattggtgggatatcatgggagacg
aatgaagatcgtcttaaggagtacttcaagacttatggtgaagttgtagaggctgtgatc
atgaaagatcgcacaacgggacgggctcgtggttttggtttcgtagtatttgcagaccca
gcagttgcagacagagtggttctggaaaaacatatgatagatgggaggacggttgaagca
aagaaggctgtgcctagagatgaccaacataccctgaatcgaagccttggcaacattcat
gggtcagcaagtcctgcacggaccaagaagatttttgtgggtggtttggcttctactgtt
acggaaactgattttaagaagtattttgatcagttcgggacaataaccgatgttgttgtg
atgtatgatcacaacacacagaggcctagaggatttggattcataacctatgattcggaa
gatgcggtggacagggttcttctgaagacattccatgaactgaacggaaagatggtggag
gtcaagagagcagtgccaaaagaattgtcccctggtccaagtaggtcccctctcgggggt
tttggttatggactaaacagggtgagcaacatcctcaatggctataatcagggatataat
ccaaactcacttggtggatatcagatgagggtggatggaaggtttagtcctcttccagtc
tctcgaactgggtattctccatttgggccaccgagctatggacttggtgccaattttggg
ccttctctaagcccaagctacagtggtagcagttacagcagtagtttgaactataataga
ggcttaaatgcttattataacggaaattcaagtagatataacaacccaattgggtataca
ggaagtaatggggtagctgggtccttcttcaatacatctggccgaaatgtttggggcagt
gctggacttaattcgacttctgctggttcagtggattatgcaacttctggaaatgggaac
tttggagttagtggtgcaacttggggactgtcaccctctgcttcagttcaaagcggagga
aatggttctggttatgcaggtgggatgcttggttatgcaaactcagagagtagttatggt
ttaggaggaagcagctttgctggtcgaagcagtggaaacagcatctctcaagcatcttat
ggtgcaagcaatggtggttatgatgggtcttatgcagatctttatggtagtagttccgtc
tatggtgatccaacttggaggtctgaaacttctgaaccagatggttctagttcctttggt
tatgggcttggaaactcagctggagatgctacaacaaaagtttctgagagctacttggca
ggatataatgttactaacagacagtcaaacagaggagttgcagcatga
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