KEGG   Nymphaea colorata (blue-petal water lily): 116258191
Entry
116258191         CDS       T07418                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
ncol  Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:ncol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncol03400]
    116258191
DNA repair and recombination proteins [BR:ncol03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    116258191
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 Prok-RING_4 RING_XB3-XBAT31 DEAD zf-C3HC4_4 zf-RING_5 zf-RING_4 MEIOC zf-ANAPC11 E3_UbLigase_EDD zf-RING_11
Other DBs
NCBI-GeneID: 116258191
NCBI-ProteinID: XP_031491206
LinkDB
Position
1:13255858..13266148
AA seq 1069 aa
MGAKATGELIESVRSVLGGDFSEMNIIRALHLAKNDVTAAINILLDTPSFSPRHKSSPFQ
MTPTPPSPSSSSPSSSSSTKRISDSERAADIEKMRQDDGLTELQGSLSTSKPLTSTGSDW
LCVGSAELTGLSTCKGRKIKVGDPVVISFPSKSNASLSSGTKTFGRGRPVATTSEIVRFS
SQQSGEIGRIPTEWSRCLLPLFNAEKIRIEAYCKWAPEILSIMDTVVLSVSVYLNSSMFR
KYQQTPLKENRQSPDESIVQPLPTLFRLLGLSPFKKAEFTPEDLYSRKRSIGTKDNSGIH
LPLEKCRKLSSNPIKMENVQEDSISETDMDKIVGTSDSSYLEEMDPPDTLQCELRPYQKQ
ALHWMCQLEKGRDLEEAATTLHPCWEAYHLGEKSEFTIYLNAFSGDATVEFPSALQISRG
GILADAMGLGKTIMTIALLLSDPPGDRLGIHPGGQACESRELNKDVDLPPNHSNTITKIP
GFNKLIKATRLLQINGGNLIVCPMTLLGQWKVVREECEGCQTLDQVPTLPFCCLLRLGGR
CSPSIFEIETHAQTGSLSLFVHYGQTRPKDAKFLAQYDVVLTTYGVLSSEFFAENTEDNG
GLYSVSWFRVVLDEAHTIKSSKSQVSMAAAALAAERRWCLTGTPIQNNLEDIYSLLRFLR
VEPWRSWGWWNRLIQKPFEEGDERGLKLVQSILRPIMLRRTKCSTDKEGRPILVLPPADV
QVIYCELTEAERDFYEALFKRSKVKFDQFVQQGRVLHNYASILELLLRLRQCCDHPFLVM
SRGDTQDFTDLNKLARRFMKGSQDDLDGESSSAPPKAFVQEVIEELRKGEQGECPICLEA
FEDAVLTPCAHRLCRECLLASWRSAMSGLCPVCRKNINRQGLITAPTESRFRVDVERNWI
ESSKVSILLNELERLHSLGSKSIVFSQWTAFLDLLQIAFSRRNLPFIRLDGTLNQQQREK
VIKKFSEENDALVLLMSLKAGGVGVNLTAASNAFLLDPWWNPAVEEQAVMRIHRIGQTKN
VTIRKFIVKGTVEERMEAVQARKQRMISGALTDQEVRNARIEELKMLFT
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgggggccaaggcgacaggggagctcatagaatcggttcgatccgttcttggcggtgac
ttttcagaaatgaacatcatccgagccctccacttggccaagaacgatgtcaccgcggcc
atcaacatcctccttgacactccttccttcagccccagacataaatcctccccatttcag
atgaccccgactcctccttcaccctcttcttcctctccctcttcttcttcatcaacaaag
aggatcagtgattctgaacgagcggccgacatcgagaagatgaggcaagacgatgggcta
accgaactacagggttctttgtcaacgtccaaaccattgacatcaaccggcagcgattgg
ttatgcgttggaagcgctgaacttactgggttgtctacctgcaaaggaaggaagattaag
gttggggatcccgtggtcatctcgtttccttcgaagagtaatgcaagcttgtcgtctggt
accaagacattcggcagaggaagaccggttgcaactacttctgagattgttaggttctct
tcccagcagtccggcgagattggtcgaatcccgacagagtggtcgcgttgccttttgcct
ttatttaacgcagaaaagatccgaatcgaagcatactgcaagtgggcacccgaaatcctc
agcattatggacacggttgtcttgtcagtcagcgtataccttaatagttccatgttccgg
aaatatcaacaaactcctctcaaggagaaccgtcaatctccggacgaatccattgttcaa
ccacttcctacattgttcagattgcttgggctttcaccttttaaaaaggctgaatttact
ccagaagatctatattctagaaaacgttccattggtacaaaggataattctggaattcat
ctgcctttagagaaatgtagaaaattgtcttcgaatcctattaaaatggaaaatgtgcaa
gaggattccatctctgaaactgacatggataagatcgttggaacttcagatagttcatat
ctagaggaaatggatccgcctgatacccttcaatgtgaattaaggccttatcaaaagcag
gcactccattggatgtgccagctggagaaaggaagagacctagaggaggcagcaacaact
cttcacccttgttgggaggcatatcacctgggggagaagagtgaatttactatttatttg
aatgccttctctggggatgctacagttgaatttcctagtgctcttcaaatatcaagagga
ggaattttggctgatgcgatgggccttgggaagaccataatgacaattgctctgctttta
tctgatcctcctggagatagacttggcattcatcccggtggtcaagcttgtgaaagtcgt
gaactgaacaaggacgttgatctgcctccaaatcattcaaatactattacgaaaattcct
ggctttaataagttgataaaagctacaaggctgttgcagattaatggcgggaatctgatt
gtttgtccaatgacattgctcggccagtggaaggtggtaagagaggaatgtgaagggtgt
caaacccttgatcaagtcccaaccctgccattttgttgcctgctaaggcttggtggtcgg
tgctcaccctcaatttttgagatcgaaacccatgcccaaactggatctctatctctgttt
gtccattatggccagaccagacctaaggacgctaaatttctagctcaatatgatgttgtt
ttaacaacttatggtgtgctttcttcggaattcttcgctgagaatacggaggacaacggt
gggctttattctgtcagctggttcagggttgtgcttgatgaagcacacactataaaatct
tctaaaagccaagtttctatggctgcagctgcgcttgctgctgaacgcagatggtgttta
actggcactcctatacaaaacaatttagaggacatatatagccttcttcgatttttgagg
gtggagccctggcggagctggggatggtggaatagacttattcaaaagccttttgaagaa
ggtgatgagcgtggtttgaagctagtccaatctatattaaggccaataatgttaagaaga
acaaagtgtagcactgacaaagaaggaaggccaatcctagttcttcccccagctgatgtt
caggtgatctattgtgaacttacagaagctgaaagggacttctatgaggccttattcaaa
aggtcaaaggtcaagtttgaccagtttgtgcaacaagggcgggttcttcataattatgcc
tccattctcgagttactcctgcgacttcgccaatgctgtgatcatccttttcttgtgatg
agccgtggtgatacacaagatttcaccgacttaaacaaactagcaagacgcttcatgaag
ggcagccaagatgatttggatggtgaatctagttcagcaccacccaaagcttttgtccag
gaagtcatagaagaactacgaaaaggtgaacaaggagaatgccctatttgccttgaggcc
tttgaagatgctgtacttacaccttgtgctcaccgcctatgtcgagaatgtcttttggca
agttggcgaagtgccatgtctggtctttgccctgtttgcaggaaaaacataaataggcaa
ggcctcattaccgcccctacagagagccgatttcgtgttgatgttgagaggaactggata
gaatcttcaaaagtttcgattcttctgaatgagttggaaaggcttcactctttaggatct
aagagcattgttttcagccagtggactgctttccttgatcttctacagattgctttttct
aggagaaatttaccatttattcgtctagatggcaccttaaaccagcaacaacgggagaaa
gttatcaagaagttttctgaagaaaatgatgcattagtgttgttgatgtccttgaaggct
ggaggtgtaggagttaatcttacagcagcatctaatgcttttctgttggatccatggtgg
aacccagcagtggaggagcaggctgtcatgcgcatacatcgcataggtcaaacaaagaac
gttaccatccggaagttcatagttaagggaacagttgaggaaaggatggaagcagtgcaa
gccaggaaacagcggatgatctctggggccctaactgatcaagaagttcggaatgctcgc
atagaggagctgaagatgcttttcacatga

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