Nymphaea colorata (blue-petal water lily): 116258356
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Entry
116258356 CDS
T07418
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03013
Nucleocytoplasmic transport
ncol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116258356
03015 mRNA surveillance pathway
116258356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116258356
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116258356
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
116258356
NCBI-ProteinID:
XP_031491330
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All DBs
Position
8:18373966..18394358
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AA seq
656 aa
AA seq
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MSSKKLSNLLVLTMRIGGANNALDSSKSESPPSDGGFQNLKMPCTKSFCGVMSDPEPCWS
LSDIVAELNALESKFSNPFIKRQQQIEMVFFWRREKSNIQGNIVSGKFVVDASDKGMDDI
EDSCEVIDNGNTNVGSRFSCDDVYLSSDSEDECHDVDFQAREISLVNRTEAVKGYLLELE
REEQLKVKEEIRDRIYSLNDYLRKEKERTTSSFACIQKDIEAKQEMDKKLDKQYQRKIAE
TCDIHLSAVQRDHEQRSEIEERKIRKEAASEDARRKEKMEREEKERLERLKAEAEARMKA
EQMKAEKLAMERAAVEAQKRAEKEAAERAAEEALKKKAAEASQRKASEEKSRTGGVVVKV
SDMASKLEQERMSKLLALVEQNKATGAGSSQAYRRHERQIRSLILQVSATVDVVRKKSLE
LVKTINDPFCPQSISVATFAEKAVSYCETQNMNMSNAFALGHVIVLVTSQVPAVMAIILA
EFHKACIFTVPKHIVYSKSAFATKEAYYKMIGYKEDGGNIESTDSYLQRLEAYMTLYAAL
IQTEIPGIANQHGLKEGWAWLARFLNVIPADRTTATALVAFLRTAGHALYRRYGNQFIKI
LRVITRRFLPDLKGKEDPLASKVINNLETYLQSKEYLSEPKGLRFAQTVESKDFGF
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctaaaaaactaagcaatttgctagtgctcacaatgagaataggaggagcaaat
aatgccctggactcatcaaaatcagaatcaccaccatccgacggaggcttccagaatttg
aaaatgccatgcacaaagagtttctgtggagtaatgtctgatccagagccttgttggagt
cttagtgacattgttgcagagttaaatgctttggagtccaaattcagtaaccctttcatc
aagcgtcaacagcagatcgaaatggttttcttttggcgcagggaaaaaagcaatatacag
ggcaatattgttagtggcaagtttgtagtggatgcatctgacaaagggatggatgatatc
gaagacagttgtgaagtaatagataatggaaacacgaatgtgggtagtcgattctcttgt
gatgatgtttatttgagcagtgattctgaggatgaatgccatgatgtggactttcaagcg
cgtgaaatctcacttgtcaataggacagaggctgtaaaaggctatttgcttgaattggag
cgtgaagagcagttaaaagttaaggaagaaataagggacagaatatattcattgaatgat
tatctgagaaaggaaaaagagcggacaacttcatcatttgcttgtatccaaaaagatata
gaagcaaagcaagagatggataaaaaactagataaacagtaccaaagaaaaattgcagaa
acttgtgatattcacttatctgcagtccagagggaccatgagcagaggtcagaaatagaa
gagagaaaaataagaaaagaagcagcctctgaagatgccagaagaaaggagaaaatggaa
cgggaagaaaaagagaggttggagaggcttaaagcagaagctgaggccaggatgaaagct
gaacaaatgaaggctgagaagcttgctatggaaagagcagcggttgaagctcaaaaaaga
gcagaaaaagaggctgcagaaagggcggctgaagaagccttgaaaaaaaaagctgcagaa
gcttcccaaagaaaggcttcagaagaaaaatctaggactggtggagtagttgttaaggtg
tctgatatggcatcaaagctagagcaggaaagaatgagtaaactattggcgttagtagag
cagaacaaagctactggtgcaggctccagtcaggcttatagaaggcatgaaaggcaaatt
cgttcgctgatcctacaggtatctgcaactgttgatgttgtaaggaaaaaatcacttgaa
ttggttaaaactatcaatgatccattttgccctcaatcaatctcagttgctacttttgcc
gagaaggccgtatcttattgtgaaactcaaaatatgaatatgtcaaatgcattcgcactt
ggccatgttattgtgcttgtcacatctcaggttccggctgtaatggcgataattcttgct
gagtttcataaggcttgcatctttactgttcctaaacatatagtttattccaagtcagct
tttgcaaccaaagaagcctactacaagatgattggttacaaggaagatggtggaaacatt
gaaagcactgatagctatttgcaacgcttagaggcctatatgacactctatgcggctttg
attcagacagaaattcctggaattgcaaaccaacatggcctgaaggaaggttgggcatgg
ctggcgaggttcctgaatgtgataccagctgatagaactaccgctacggcattggtggct
tttctcaggactgccggacatgccctgtaccgcagatatggaaatcaatttataaagatt
ctccgtgtaatcactcgaaggttccttccagatctgaaaggaaaggaggaccctttggca
tcaaaggttatcaacaaccttgagacttaccttcagtccaaggagtacctctctgagcca
aaaggcctacgctttgcacaaaccgtggagtcgaaggatttcggattctga
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