Nymphaea colorata (blue-petal water lily): 116258562
Help
Entry
116258562 CDS
T07418
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116258562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116258562
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116258562
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116258562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
116258562
NCBI-ProteinID:
XP_031491614
LinkDB
All DBs
Position
1:15453763..15454944
Genome browser
AA seq
279 aa
AA seq
DB search
MKTGLDGSTGMPTAKEIRVREVWAHNLESEFELIRELVDQFPFVGMDTEFPGVVIRPPAN
FRHRSDCLYSTLKANVDALNLIQVGLTLSDERGRLPDLGDPSASFIWQFNFRDFDPSRDI
YAPDSLAILERSGIDFARNLTDGVDSGRFAELLMSSGLVCNEAVCWVTFHSAYDFGYLLK
LLTCQALPASRRDFLRLMSVYFCNVYDLKHLMRYTASLYGGLNRLAESLSIERRVGNCHQ
AGSDSLLTWEAFLRMKDDIFRGGMEKYAGVLYGLEGVCY
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccggtttggacgggtcgacggggatgccaacggcgaaggagattcgggtgaga
gaagtgtgggcgcacaatctggagtcggagttcgagctgattcgtgagttggttgaccag
tttcctttcgttggtatggacaccgagttccccggcgtcgtcatccgcccccctgccaat
ttccgccaccgatccgactgcctgtactccaccctcaaggccaacgtcgacgcgctcaac
cttatacaggtggggctaaccctctccgacgagcgcggccgcctccccgacctcggcgac
ccctctgcgtccttcatctggcagttcaacttccgtgactttgacccctcccgagacatc
tacgccccggactcgctcgccatccttgagcgcagcggcatcgatttcgcccgtaacctc
accgacggcgtcgactccggccgcttcgctgagcttctgatgtcgtccggcctcgtctgc
aacgaggccgtctgctgggtcacgttccacagcgcctacgattttgggtacttgctcaag
ctcctcacctgccaggcgcttcctgccagccgccgggacttcctccggctgatgagcgtc
tacttctgcaacgtgtacgacctcaagcaccttatgcgctatacggccagcctctacggc
ggccttaacaggctcgccgagtcgctcagcatcgagcggcgcgttggaaattgccatcag
gccggctccgacagcctgctcacctgggaggccttcctccggatgaaggacgacatcttc
cgcggggggatggagaagtatgcaggggtgctctatggactagagggtgtttgctattga
DBGET
integrated database retrieval system
