Nymphaea colorata (blue-petal water lily): 116258679
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Entry
116258679 CDS
T07418
Name
(RefSeq) LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncol03036
]
116258679
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116258679
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
116258679
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
116258679
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Adaptin_N
HEAT_2
HEAT
Cnd1
PTM_DIR17_Tudor
TPR_DNAAF5
CDC45
HEAT_GCN1
HEAT_GCN1_C
Tudor_5
Motif
Other DBs
NCBI-GeneID:
116258679
NCBI-ProteinID:
XP_031491838
LinkDB
All DBs
Position
8:complement(21111926..21130512)
Genome browser
AA seq
1632 aa
AA seq
DB search
MAQNLRQKLKEVGSKLEKPPQSKASLLKLLKQAEICLSEIDQSPSKSLLGSVQSCANTVA
KEEYLKHQDRDVQLLVAACICETMRIMAPEPPYTDDVLKEAFSLIVGTLTSLSEINSPSF
GRSIAILETLGKYRSCVVLLDLECNDLVREIFTTFLSVASNDHPEAVLMSMQSIMVLLID
ESEDVQEEPVLALLAALGQQKKDISSAGRRLAMNVIKQCAVKLEPCINKLLISALSRTAS
SQNGHFDHHEAIYEIYCGAPQILHGVVAYMIEELSVDQLDVRLKSVNLLGRIFSLPESNI
TEVFRPLFLEFLKKLTDSAAKVRISAVEHVKACLLCNFCRPDAAEIISALADRLSDHDEH
VREQAVAAICDVIKHTSNLIPVGTVKLVSERLQDKSITVKRYTQERLVELYRLRCLKCSD
PSFDYDEYKWLPRKILRCFYDNDLRYETLDIFLSDSLIPTEITVKDYMKHWIAAFSEFEK
IETKAFEQVLLQRKRLQEELQSYLMLRKKYQDNDAPDILKRTLGCVRAMSRLFKDPSRAE
ESFQMLNQLKDDNVWKTLTSLLDYNIGTAQSLMARDDLLKAIGDKHPLYDFLATLSIKCS
YILFNKEHVKEILDELLLHKSAGNGSLVLSCLNLLVILASFFPSIFRGAEEQLVLLLKDD
NETIKEGIVHILAKAGGSIRDQLPMLAGSVDILLERLCLEGTRKQAKYSVQALAAITIDD
GLKSLSLLYKHLVDMLEKKTHLPAILQSLGCIAQIAMPIFETREEEIVGFISDKIMDGSI
VESTSQTDWDDKSEKCLLKIFAIKTLVKSYLPVKDAHVRSGIENLLEMLKGVLTFGEVSQ
GVESSAVDKAHLRLASATAILRLSKVWDHKIPIDVFHLTVRISQDIYPQVRKLFLSKVYQ
YAKDRLVDAKYVIALPLGMDGMTEHEYKEYRQCLVEIVEMLYREARSRQLYVPSGQNVPS
DYPEHILAYFVHSLAHDDAYPNLDERPSATAFVPIYRKLHTFLSVLLHQNEKEKQEAICT
DVHDRACAIISVFQSIKSSADLVDLTKSKNSHVICDIGLGIMKHLCSKQFDTDLTNSIPL
PSVLYGPVEKSNDRMANGDCPLSWLSRDDLFVHFQSLSLQTGAQVEPAALKDKKKSKPRD
KDETELPLKKMMKMLKSNKSKKKATVTPTSLGSTKKQEDDLDILSMVKEIESENLTGGKS
LEVGELATSLDREETINGENNGDVSVSQRNDIKINKEANVRDSNYKRKDRDLDKLTGDDS
VKSNKKHKKLEDNLNGGTDLTSESVHVDHSSNHLEGELSIDRVGVRQSNETDLTETAVRT
GKRLPSRGKRKSTTWTLEDDIHNDGEAKHNKKVGSSLPDEKFSSTRGYVRSTKKSKRKSA
ALLEKCSFGKADKSDLELIGCRVKVWWPMDKRFYKGVVQSFDVSKKKHVIVYDDGDVETL
KLEKEKWERINDDDDDEEQEEEEGGGDDDGNEDNDSGGDMLKQPESSTPSTSQQKSSRSR
IVKRGRAASGKRKRKVKKKENSSNSSVKASLKSSKTSSPSQEAESEDASQHSDLHDQDGS
RPIDEDHEEETKTAASEALPERENGDDDLKVTNEDNTIDEDKLQPSSSQIIEGSKEKQKD
CREPKKESGEPL
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaacctccgccagaagctgaaagaagtagggtctaagctcgagaagcctccg
cagtcgaaggcttctcttttgaagcttctaaagcaagcagaaatttgtctttctgagatt
gatcagtcaccctccaaatcgttgttggggtccgtacaatcatgtgcaaatacagttgct
aaggaagaatatctgaagcaccaagatagggatgtccagcttttggtggcagcttgcatt
tgtgaaacaatgaggattatggcaccagagcctccttatactgatgatgtactaaaggaa
gcattttctctaattgtggggacacttaccagtttaagtgagataaatagtccatccttt
ggaagaagtattgctattctggagactctaggaaaatataggtcatgtgttgtcctgctg
gatcttgaatgcaatgatttagttagagaaatattcactacatttctctcagttgccagt
aatgatcatccagaagctgtccttatgtcaatgcagtcaattatggtcctcttaattgat
gagagtgaggatgtccaagaggaacctgtacttgctttgttagctgcacttggtcaacaa
aaaaaggatatatcttcagctggacgaagactagctatgaatgttattaagcaatgtgct
gtaaagcttgagccttgcataaataagttgcttatatcagcattatcaaggactgcaagt
tcacagaatggccattttgatcaccatgaagctatttatgagatttactgtggcgcacct
cagatcttacatggagttgttgcatacatgattgaagaactatcggtggatcagctagat
gttaggctgaagtcagtaaacctgcttggtcgcatattttcattacccgagagtaatata
actgaagtgtttcgacccctttttttggaatttttgaaaaaactcacagacagtgcagca
aaagttcgaatttctgctgttgaacatgtgaaagcttgtctattgtgtaacttttgtaga
cctgatgctgctgaaattatctctgcccttgctgatcgtttgtcagatcatgatgaacat
gttcgagaacaagctgttgcagcaatttgtgatgtgattaaacatacttcaaatcttatc
ccagttgggactgtcaaacttgtttctgagcgtcttcaagacaaatctatcacggtcaaa
aggtatacccaggagaggctggtggaactatataggcttcgatgtttgaaatgctcagat
ccttcatttgattatgatgaatataaatggttacctagaaagatcttgagatgcttttat
gataatgacttgagatatgaaacactcgacatttttctatcagattcattgatacctact
gagatcacagtgaaggattacatgaaacattggattgcagccttctccgaatttgaaaaa
attgaaacaaaggcttttgagcaagttcttctgcagagaaagaggttgcaggaggaactg
cagagttatcttatgctgagaaagaagtaccaggataatgatgcccctgatatcctaaag
agaactttagggtgtgttcgggcaatgtctcgattgtttaaagatccttccagagcggag
gagagttttcaaatgcttaatcagttaaaagatgacaatgtttggaaaactttgactagt
cttcttgactataacattggtactgcacaatcattgatggcgagggatgacttgctcaag
gccattggtgacaagcatccactgtatgatttcctagctacattgtcaatcaaatgttct
tacattcttttcaacaaggagcatgtgaaagaaattcttgacgagcttcttctccataag
tctgctgggaatggcagccttgtcttatcatgcttgaatttgcttgtgatccttgcaagt
ttctttccatcaatttttagaggggcagaagaacaactagtccttctcctcaaagatgat
aatgagacaatcaaggaaggaattgtgcatattcttgcaaaggctggtggatctattaga
gatcaactcccaatgttggctggatcagtagacattttattagagagactatgcttagaa
ggtacaaggaagcaagccaaatactcagtgcaagctcttgctgcaataacaatcgacgat
ggccttaagtcactttcattgctttataagcatctggtggatatgctcgagaaaaaaact
catcttcctgccatcctgcaatctttgggttgtattgcacaaattgccatgccaatattt
gaaaccagggaggaggaaattgttgggtttatatcagacaaaattatggatggaagtatt
gttgagagcacttctcaaacagactgggatgacaaaagtgaaaaatgcttgctaaagata
tttgctatcaagaccctggtaaagagctatttgcctgttaaggatgctcatgtacgaagt
gggattgaaaaccttttggaaatgcttaaaggcgttctgacatttggggaggtgtcacag
ggtgtagaatcaagtgctgtggataaggcccatctaaggcttgcatcagcaactgcaatt
ctacgattatcaaaagtttgggaccataaaataccaattgatgtctttcatttaactgta
agaatctcacaggatatttatccacaagtaaggaagcttttcctaagtaaagtttaccag
tatgcaaaagatcggcttgtggatgcaaagtatgtaattgcacttccactgggcatggat
ggaatgactgaacatgagtacaaagagtacaggcagtgtcttgttgaaattgtcgagatg
ctctaccgtgaagcaagatcaagacagctttatgtaccatctggccagaacgtgccttca
gactatcccgagcatatacttgcatattttgtccattcccttgcacatgatgatgcatac
cctaatcttgacgaacgtccaagtgctacagcgtttgtgccaatttatcggaagttgcac
acctttctttcagtgctcttacatcaaaacgagaaggagaaacaagaggctatatgcacg
gatgtacatgacagagcttgtgccatcatctcagttttccaaagtatcaaatcttctgca
gatctagtagatttaactaaatcaaagaattcccacgtgatatgtgatattgggcttggt
attatgaagcatttatgcagtaagcagtttgatacagatcttaccaattccattcctcta
ccttcagtactttatggcccagttgagaagagtaatgaccgtatggccaatggtgactgc
ccactttcatggttgtctcgtgatgatctatttgttcatttccaatccttgagcctgcag
actggggctcaggttgagcctgctgctctcaaagacaagaagaaatctaagcctagagac
aaagatgaaacggaattgcctcttaagaaaatgatgaaaatgctcaaatcaaacaaatcc
aagaaaaaagctacagtaacacccacttcattgggtagtacaaagaaacaagaagatgac
ctagacatattgagtatggtgaaggaaattgaatcagaaaatctcactggtggcaagagc
ttggaagtaggggagcttgcaacttctttggatagagaagaaacgattaacggcgaaaat
aatggtgatgtgtctgtgtctcaaaggaatgacataaaaataaacaaggaagcaaatgta
cgtgattctaattataaaagaaaagatcgtgacctggataaactgaccggagatgactcc
gtaaagtccaacaagaagcataaaaagttagaggacaatttgaatggtggaacggattta
acatcagaatcagttcatgtggaccattcctcaaatcatttagaaggtgaattatctatt
gacagagttggtgtcagacaaagcaatgaaaccgatttgacagaaacagcagtgcgaaca
ggtaaaaggttaccatcaagaggtaaaagaaaaagtacaacttggactctggaggatgac
atacataatgatggagaggccaagcacaacaaaaaagtgggttcctccttgcctgatgag
aagttttctagtacaagagggtatgtaagatctactaaaaagtctaaaagaaaaagtgct
gccttgctggagaagtgttcttttggaaaggctgataaaagcgatttggagttgattgga
tgcagagtgaaagtttggtggccaatggacaaacggttctataaaggcgttgtgcaatct
ttcgatgttagcaagaagaaacatgtgattgtatatgatgatggagatgtcgaaacactc
aagttagaaaaagagaagtgggagaggatcaatgatgatgatgatgatgaggagcaggag
gaggaggaggggggtggtgatgatgatggtaatgaagataacgacagtggtggcgacatg
ttaaagcagccagagtcatcaactccgtccacctctcagcaaaagtcatccagaagcaga
atagttaagagaggccgtgctgcctctggaaagagaaagagaaaagtcaaaaaaaaggaa
aatagctccaattcaagtgtgaaagcttcacttaaatcatcaaaaactagttctccttct
caagaagccgagagtgaagatgcatcccaacattccgatcttcacgatcaagatggttca
cgaccgattgatgaagatcacgaagaagagacgaaaaccgctgcttctgaagctttgcca
gaaagagagaacggtgatgatgatctgaaagttacaaatgaagacaacactattgatgag
gacaagctgcagccatctagctcccaaattattgaaggttcgaaagaaaagcagaaggat
tgtcgtgaaccaaagaaagaatcaggggagcctctgtga
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