Nymphaea colorata (blue-petal water lily): 116258765
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Entry
116258765 CDS
T07418
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116258765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116258765
03036 Chromosome and associated proteins [BR:
ncol03036
]
116258765
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116258765
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116258765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
116258765
NCBI-ProteinID:
XP_031492002
LinkDB
All DBs
Position
8:15946430..15954103
Genome browser
AA seq
1088 aa
AA seq
DB search
MAATSSDPVSVSRSHGVSALGEMSLLKKRKFSPSTVALRTADYDCIAALLPTLTYDDYYI
EPSLIDLANREHADAGYCSRVSNFTVGRVNYGSIRFFGETDVRWLNLDQIVRFDQNQVVV
YEDEGSKPKIGSGLNKAAEVTLVLNFPPKEALFALDDNGMENFVFKLKNKTEKQGARFIS
FNASNREWKFAVRHFSRFGFTEEDEDDMDIADATVEEGPENSREGTREEEKRHENDGMMV
DDPRLSPSGAVLSHSLPAHLGLDPLKMQELRMVMFPTGEEDEELFDSFSRQKLSFKKQAS
RTDAANTPPLTSGQVSTLQSSGQRKSHRITPTAIWGTPSPLSSSPSSKQALIEYDVSKTS
PGPSTNILMAQQNKAVLPRMRKIDGFRVDLKCDSPVGNLSNAIVDAALFMGRSFRVGWGP
NGLLAHSGLPVRNNGYEKGLSSLVNIERVAFDQTVRDEEKKVKEELIDLRFISPLNLHKS
LEYETVSIQVGSFNLKLRRPICSSLKLPEVCRHYTEIVEQQFDVSGLCASDRVILMHQVM
IWELIKVLFSEREGSSTLALTRVDDVVDMLADKKMEPLDIEPEAEPFVRRAEFSSWLQES
VCHRVQAEVSCLNDGDNLIHIFSLLTGRQLDAAVELAACQGDVRLACLLSQAGGSMVSRS
DMASQLEVWRSNGLDFNFIEKDRLRLYELLAGNIQGALHDSVLDWKRYLGLLMWYQLPPD
TSLPVIIDTYEHLLDQEIAPDPVPVYIDEGLLDQATDISTGVHYDLAYYLMLLHAKKEET
SGVLKTMFSSFSSTFDALDHHIIWHQRSILEAVGAFNYKDLYVLDMSLVSQLLCLRQCHW
AIYVVLNMPQDLDVPGLHASVIKEILFQYCEIWSSHEEQRKFIEDLGIPSAWMDEALAIY
FQYYGNQMKAFNHLLACSSWQKAHLIFVISIAHSLFLSSEDSRLWKLATSLEEHKSEIAD
WDLGAGIYIDFYLLRGSLRGEDTMPELDSIDKKNVACRDFFTRLNKSLLVWGSKLPLDVR
ATYSEMANELCMLLMSSNGEKSTCANQLSRFNTLLGAPIPEDQRFSHMQDAVSAFTFWLK
EGVLATDL
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacgagctcagatcccgtctccgtttctcgaagccacggcgtatctgccttg
ggcgagatgtctttgttgaagaaaaggaaattttctccgagtacggttgctttaaggact
gcagattatgattgcatcgcagcgttgttaccgacattgacctacgatgattattatatt
gagccatccttgatagatttagctaacagagaacatgctgatgctggatactgcagcaga
gtttccaattttacggtgggtagagtgaattatgggagcattagattcttcggtgaaacg
gatgtgaggtggttgaatttggatcagattgtccgttttgaccagaaccaagttgttgtt
tatgaagatgaaggcagcaaacctaaaattggctctggccttaataaggctgctgaagtc
actttggtacttaactttcctcctaaggaggccttatttgctttagatgacaacggtatg
gaaaattttgtattcaaattgaagaacaagacagagaagcagggcgcccgttttatttca
ttcaatgcttctaatcgtgaatggaagtttgctgtccgtcattttagtagatttggattt
accgaggaagacgaggatgatatggacatagctgatgcaactgtagaggaaggtccagaa
aattcacgtgagggaactagggaagaggagaaaaggcatgagaatgatggaatgatggtt
gatgatccgaggcttagtccatctggagctgtattgtctcattctcttccagcacatctt
ggtcttgatcctttgaagatgcaggaattaagaatggtaatgtttcccactggagaggag
gatgaagagctttttgattccttttcccgccagaagctgtcctttaagaaacaagcttca
agaactgatgctgccaatacccctcctttgacaagtggtcaggtctcaacactccaatca
tctggtcagaggaaaagtcacaggataactccaactgcaatatggggaacaccgagccct
ctaagttcatctccatccagtaagcaggcattaattgagtatgacgttagcaaaactagc
ccgggcccgtcaacaaacattctcatggctcagcagaacaaagctgttctgccaaggatg
aggaaaattgatggtttcagggtggacttgaaatgtgatagccctgttggtaacctatct
aatgctatagtcgatgctgcattgttcatggggaggtcctttcgtgttggatgggggcca
aatggattacttgctcatagcggccttcctgttagaaataatggttatgagaagggatta
tcttctctagttaacatcgaaagagttgcttttgatcaaactgttagagatgaggagaaa
aaggtaaaagaggagctgattgatttgcgatttatttctcccctgaatctgcataagtca
ttggaatatgaaacagttagcatccaggtgggttcctttaacctaaagctccggagaccc
atttgtagttccttaaaacttccagaggtttgcaggcattatactgagattgttgaacag
cagttcgatgtttcaggattatgtgcatctgatcgtgtcattctgatgcatcaagttatg
atatgggagttaattaaggttctattttcagaaagagaaggtagcagtaccttagcactc
accagggttgatgatgttgtagacatgcttgcagataaaaagatggaaccattggatata
gaaccagaggcagagccatttgttcgccgtgcagagttcagttcttggttgcaggagagt
gtttgtcatcgtgttcaagctgaagtaagttgtctaaatgatggtgataacttgattcat
attttttcgcttttgactggacgacagcttgatgctgctgtggaattggctgcatgtcaa
ggggatgtcagattggcttgtcttttgagccaagctggtggatctatggtgagccgatca
gatatggcatcacagcttgaggtatggagaagcaatggtctagacttcaactttattgaa
aaagacagattacgactatatgagcttcttgctggtaatattcaaggggcacttcatgat
tcagtattagattggaaaaggtaccttgggttgctgatgtggtatcaacttccaccagac
acatcattgcctgtcattattgacacgtatgaacatcttcttgatcaagaaattgctccg
gatccagttcctgtatatattgatgaaggacttcttgatcaagctactgatatcagtaca
ggcgtccattatgatttggcatattatcttatgcttttgcatgctaaaaaagaggagacc
tctggagtgctgaaaaccatgttcagctctttttcttcaacttttgatgcccttgatcac
catataatttggcatcaacgttctatattagaagcagttggtgctttcaattataaagac
ctttatgtacttgacatgagtcttgtttctcaacttctatgtcttaggcagtgtcattgg
gccatctacgttgtccttaacatgccacaggatttagatgttcccggtttgcatgccagt
gtgataaaagaaatcttatttcagtactgtgaaatttggagttcacatgaagagcaacgc
aaattcattgaagatctaggaataccatcagcatggatggacgaggctttggctatctat
ttccagtactatggtaaccagatgaaggccttcaatcatcttcttgcttgttctagctgg
cagaaagctcatttaatctttgtcatatcaattgcacattccttatttttgtcctctgaa
gattcacggttgtggaagcttgcaacatccttggaagagcacaagtcagaaattgcagac
tgggatttgggtgctggaatctatattgacttttatctgctacggggttctttgagaggg
gaagatacaatgcctgagttggattctattgataagaagaacgtggcctgtagagacttt
ttcacacgcttgaataagtcactgctagtatggggaagcaaattgcctttagatgtgagg
gcaacctattcagagatggcaaatgaattgtgcatgctactcatgtccagcaatggggag
aaatctacctgtgctaatcaattgagccggttcaatactcttcttggtgcacccatacca
gaagaccaaaggttttctcatatgcaggatgcagtgtcggctttcacattttggcttaaa
gaaggcgtcttggcaacagatttatga
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