Nymphaea colorata (blue-petal water lily): 116258875
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Entry
116258875 CDS
T07418
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03420
Nucleotide excision repair
ncol04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116258875
09124 Replication and repair
03420 Nucleotide excision repair
116258875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ncol03051
]
116258875
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116258875
Proteasome [BR:
ncol03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
116258875
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116258875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_Ucp12
Rad60-SLD_2
CUE
TECR_N
Crinkler
Dsc3_N
UBA_3
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
116258875
NCBI-ProteinID:
XP_031492172
LinkDB
All DBs
Position
8:16131288..16140297
Genome browser
AA seq
387 aa
AA seq
DB search
MKLFVKTLKGNHFEVDVEPSDTVAAVKKHIETIHGQDVYPCAQQLLIHQGKVLKDETTLA
DNKVAENNFLVIMLTKPKTSMSGASSTPAPANPLPSNPPTLSTAAPQAAPAVPPPAPPVA
TPTPTASGAPAPTPATPTPNVDAYGQAASNLVAGSNLEQVVQQILDMGGGSWDRETVVRA
LRAAYNNPERAVEYLYSGIPEQAEPPASVARAPAAGQDANPSVPAPQPAQPTVPSSGPNA
NPLDLFPQGLPSMGSNAGGGSLDFLRNSQQFRALRTMVQANPQILQPMLQELGRQNPQLM
RLIQEHQTDFLRLINEPVEGAEGDLLAQLAANMPQAVQVTPEEREAIERLEAMGFDRAIV
LEVFFACNKNEQLAANYLLDHYNEFEE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttcgtgaagacgttgaaggggaaccacttcgaggtcgatgtggaaccctcc
gatacggttgcggccgtcaagaaacacatagaaaccatccatggtcaagatgtttatcca
tgtgctcagcaactactcattcaccaagggaaggttctgaaagatgaaactacgttggct
gacaataaagttgctgaaaataatttcttagtcataatgttaaccaaacctaagacctca
atgagtggagcctcgtcaaccccagctccagcaaatcctttaccttctaatcctccaact
ttgtcaacagcagctcctcaagctgctccagcagtgccacctcctgccccgcctgtggct
actccaactccaactgcaagtggagctccagcacctacacctgccacaccaactcctaat
gtggatgcctatggacaagctgcatcaaatcttgttgctgggagtaacttggaacaagtt
gttcagcagattcttgacatgggtggaggaagttgggacagagaaacagttgtgcgtgct
ctacgagctgcttataataatcctgagagggctgtcgagtacttgtattcgggtattcct
gagcaagcagaaccacctgcatctgttgctcgagctcctgcagcagggcaagatgcaaat
ccttctgttcctgcacctcaaccagctcaaccaactgttccttccagtggaccaaatgca
aatcctttagatcttttccctcagggtcttccaagcatgggctccaatgctgggggtggt
agtttagactttctaaggaacagtcagcagtttcgagctttgaggaccatggtgcaagca
aacccccagattttgcagccaatgcttcaagagttaggcagacaaaatcctcaactcatg
aggctcattcaagaacatcaaactgactttcttcgtcttataaacgaacctgtggaaggg
gcggaaggggatctgcttgcgcaactggccgcaaacatgccccaagctgtgcaagttaca
ccagaagagcgtgaagccattgaacgtctggaggctatgggtttcgatagagcaatcgtg
ctggaagtgtttttcgcgtgcaacaagaatgagcaactggcagcgaattaccttttggat
cactataatgagtttgaagagtga
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