Nymphaea colorata (blue-petal water lily): 116258878
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Entry
116258878 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116258878
KO
K19022
AP-5 complex subunit beta-1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116258878
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
116258878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
116258878
NCBI-ProteinID:
XP_031492178
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All DBs
Position
8:complement(20085981..20090484)
Genome browser
AA seq
1168 aa
AA seq
DB search
MEKPGKQLSLPEWESLIEDFQSGGPTQTKWLTLYPSPSLLELALNTILRKEFPIKSQLIF
FVEEFSSVMIEPLDAEPALGSVVQALRALVQSPIDGVSVTYALKEQMMVSMTSVVIVADG
LRRAPHHLESLVALLLTVINRPNHGPDRQSRAVACECLRELERAYPCLLVEILGHLWTLC
QSERTHASQNYILLLTTIVNNLVSATTSNARAKPGVPASSSPSILSTSIPLVPFNRPNFL
VNSSSAPEFENGVRSFAGRELSSVNMKELRRVVAFLLEQPQLLTACGLLEFMSMLMGVAV
VLGLQVSLLKVQFSGLIYSYDPILCHIILMLYSKFSDAFDGEEGKIADRLALISKEVSAQ
LVFRLLSVHWLLGLEVFCLKKDKKQTIVTMASQFYPHVFDPLALKALKLDLLVHCIIRLD
HSLAALLPSANKRSEDPVMEKRGSQSDLDCGVRTTKLFEDGLHCVSAFKWLPPNSTETLV
AFRMLHKFSISAIPHEVPDSSVTVIFTESASFCMLRTLLVKTLLEFRRMVPVIVTFVDRL
LGCGSHKWLGERLLQTLDTQLLGKLAPDQWLTSYFPIFDRIAETVAIPPRSLLELLTTFT
VALVKNYAPEKGVMPWSQGSKVLSICRTLLMYHHSSRIFGGLSRLLSFVCQFFPDLEVRD
NARIYLRMLVCIPGKKLRHILNLGEQLPGDASSTHLSSFLQSQSPTAFRDVNKTRDISSY
ILLERVVPLIVKQSWSLTIPSQVIEDGGHSYLLNDPSTVTSDPDTGVPSDGLNFIESEIR
HAPQEPLRVMDSNVAELLGTLRRHFAIIPDFRHMPGVKIRIPCMLTFKSASSNHLLGLDL
QVADSDGNRRQLALYAITVSFSSYARYGRIPPFRIPLLLARPSTDANDFSMGAQEENSVT
VYSKNGVTTEQKGHLSLTHDDMNRYGAFGALVIIELEPREPVPGAVDVTIEANIDNGQSI
SGKLHSVTVGIEDMFLKAPPEISDESLPDYYSDLFHSLWEACGDASTFGREVFALKGGKG
VAAISGTRSVKLLEAPSYVVIGAVERSLASFVVTVIGEPLVTVVRDGGVIKDVLWKEESP
TQTSEVNSLVPYASGPQQLKYISDGRETHSNPGKRNMGYIHVLIFLPPRFHLLLQMEVSE
FSTLVRVRTDHWPCLAYIDEYLEALILS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacctgggaagcagctctccctcccagagtgggaatccctaattgaggatttc
caatcaggaggtccaacgcagaccaagtggctcacgctctacccgagcccttctctcctg
gagctcgccctcaacaccatcctcaggaaggaattccccatcaaaagccagttgatcttt
tttgtcgaggagttttccagtgtcatgattgagcccctcgacgccgagcctgcgctcggc
agcgtggtgcaggcgctcagggcacttgttcaatcgccgatcgatggtgtttccgtaacg
tacgccttgaaggagcagatgatggtgtccatgacttcggtggtgatagtcgctgacggt
ctccgccgcgccccccaccatcttgagagcttggtggcgctcctcctgacggtaatcaac
aggcctaaccatggccctgaccggcaatcccgggccgtcgcctgcgagtgtctccgggaa
ctcgagcgcgcatacccttgtctcctcgtcgagattctgggccatctctggaccctgtgc
caaagcgagaggacgcatgcctctcagaactacatcctcctactgaccaccatcgtcaac
aatcttgtttctgcgacaacgagcaacgctcgagcgaagcctggtgttcctgcttcatcc
tccccttcgatactttcgacttcgatccctctggtccccttcaataggcccaattttctg
gtgaactcgtcctctgccccggaattcgaaaatggtgtgagatcgtttgcaggaagggag
ctcagttccgtgaatatgaaggaattgcggcgagtggttgccttccttcttgagcagccg
cagcttcttacggcttgcggattgctggagttcatgtctatgcttatgggtgtcgccgtg
gtgttaggtttgcaggtttccctcttgaaggtgcagttctctggcttgatttattcttat
gatcctatactctgccacattattttgatgctgtactcgaaattttccgatgctttcgac
ggtgaagagggcaaaattgctgaccgattggcgttgatctccaaggaggtttcggcgcaa
cttgtgttccggttgctgtcggtgcattggttgttaggtttggaagttttttgcttgaag
aaggacaagaaacagaccatcgttaccatggcctcccaattctacccacatgtgttcgac
ccgctcgcactaaaagcactcaaactggatttgctggtgcattgtatcatccgtcttgat
cattcacttgccgcgttgcttccttcggccaataagcggtctgaagaccctgttatggag
aagagaggctcccagagcgatttggattgtggggttcggacgacgaagctttttgaggat
ggcctgcattgcgtttcagcattcaaatggttgccgccaaatagcacggaaaccctcgtg
gccttccgaatgctgcataaattttcgataagtgctataccccatgaagtacctgattct
tcggttacagtgattttcacagaatctgccagcttctgcatgctgcggactctgcttgtt
aaaacattgctggagtttcggagaatggttcctgttattgttaccttcgttgaccggctg
ctgggttgtggctcccacaaatggttaggagaacgcctgctacagacgttggacacacag
ttacttggcaagcttgcgccagatcaatggttgacatcgtacttcccaatctttgacaga
attgcagagactgttgcaatacctccacgttctttgctggagttgcttacaacgttcact
gttgctctagtgaaaaattatgctccagaaaaaggagtgatgccttggtcacaaggaagt
aaagtgctaagcatatgcagaacgttgcttatgtatcatcatagttctagaatattcggt
gggttatcacgccttctttccttcgtctgtcagttctttccggacttggaggttcgtgat
aatgcaaggatttatttgaggatgcttgtatgcattcctgggaagaaactgaggcacatt
ctgaaccttggggagcagcttccgggggatgcatcatctacccacctttcctcatttctc
cagtcgcagtctcctacagcttttcgtgatgtgaataaaacacgtgatatttcttcatat
attcttcttgaacgggttgtaccacttatcgtgaagcaatcatggtcattgactatccca
agtcaggtgattgaagatggcggccatagttatcttttaaacgacccgtcaaccgtcacc
tcagatcctgatactggagtcccttcagatggtttgaacttcatagaatctgagataagg
catgcgcctcaggaaccattgcgtgttatggattcaaatgtcgcagaacttttgggaaca
ctcagaaggcatttcgcaattatcccagacttccgccacatgccaggagtcaagatcaga
ataccgtgtatgctgacattcaagtctgcgtcctcaaaccatcttttggggcttgatttg
caggttgcagattcagatggaaataggagacagttggcactgtatgcaataactgtttcc
ttctcatcttatgcacgttatggtcgaattccaccattccgaattcctttgcttcttgct
agaccatcaacagatgccaatgatttctctatgggtgcccaggaagaaaattctgttact
gtttattcaaaaaatggggtgacaactgagcagaagggacacttaagtctcacccacgat
gatatgaatagatatggagcatttggagccttagtgataattgaattggagcctcgagag
ccagtacctggggctgtagatgttacgatcgaggcgaatattgataatggacaatccatc
tcagggaagctccatagtgtcacggtgggtatcgaagacatgtttcttaaagcccctcca
gagatttcagacgaatcacttcctgattattactcagatcttttccattcattatgggaa
gcgtgcggagatgccagtacctttggcagagaagtattcgcgcttaaaggcggaaaaggt
gtggctgctattagcggtacaagaagtgtcaagctgttagaagcaccgtcttatgtagtt
ataggagcggtcgaacgttctttggcatcctttgttgttaccgtcattggtgagcctcta
gtcactgtggttagagatggtggcgtaattaaggatgttctttggaaggaagagtctcca
acgcaaacaagtgaagttaacagcttggttccatatgccagtggtccgcagcagttgaag
tatatttctgatggtagagaaactcattcaaatcccggtaagagaaacatgggatatata
catgttctgatatttcttcctcctagatttcatctcctcctccaaatggaggtatctgaa
ttttcaacacttgtacgagtcaggacagaccattggccatgccttgcatatattgatgaa
tacttagaagctttaattttgtcttga
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