Nymphaea colorata (blue-petal water lily): 116259680
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Entry
116259680 CDS
T07418
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116259680
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
90S particles
Other 90S particles
116259680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_IFT122_1st
VPS8_N
Beta-prop_Vps41
WD40_like
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116259680
NCBI-ProteinID:
XP_031493418
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Position
8:24161699..24166047
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AA seq
528 aa
AA seq
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MVRKEGSMKVRKRSQSSIVNRKQRNPRSRSSFDDDRFFNKRNKRTIAEDEEIRESDYDDD
DEFDGKEKREGEEGAQELEPEDVETADEKRVRVAKAYLEKIRAITRHEEEDGYVDEDEDE
AKAEEARKGMRDSLVADFLQQEQLEESGRVRRQLALRVQKPVEGFRLLVKHRKAVTAVSL
SDDDLKGFSASKDGTIFQWDVESGKTEKYSWPSWDILSSHGARKPESPSIKWSNHVLALA
VSSDGRYLATGGLDRHVHLWDVRTREHIQAFPGHRRPVSCLIFRQGTSQLFSGSFDRSIK
IWSAEDRSYLGTSHGHEGEILAIDCLRKERTLTVGRDRTMRLSKIPEETHLIFRSSTASL
ESCCFISNDEFLSGSDDGSIELWSLLKKKPIFVVRHAHSMLAPNTNLNGVCDERKMVNGH
SDYEHSEAGFLKPSTQSWVGAVAVCRGSDLAASGAGNGLVRLWAVGDEQRIISPIHDVPL
NGFVNSLAFAKSGRFLVAGVGQEPRLGRWDRISDAQNGVVLQPIKLMV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggtcagaaaggagggctccatgaaagtgaggaagaggagccagtcttccattgtgaat
aggaagcagagaaaccctaggagcaggtcttcatttgatgatgaccgcttcttcaacaag
agaaacaagcggacaattgcagaagatgaagagatcagggaaagcgattatgatgatgat
gatgagtttgacggaaaagagaaaagggaaggagaggagggggcgcaggaattggagccc
gaagatgttgagacggcagatgagaagcgcgttcgcgtggcgaaggcatacctggagaag
ataagggcaatcacaaggcatgaggaggaggatggctatgtggatgaggatgaagatgag
gcgaaggcagaggaggcgcggaaggggatgagagactcacttgttgcggattttctacaa
caagaacagctagaagagagtgggcgggtgcggcggcagctcgctctgagggtgcaaaaa
ccagtggagggtttccgtttgttagtcaaacatcgaaaagctgtgactgctgtttcatta
tctgatgatgatctcaaaggattttctgcatccaaagatggaacaatctttcaatgggat
gttgaaagtggcaaaactgagaagtactcgtggcccagttgggacattcttagctcgcat
ggtgctagaaagccagaaagtccttcgataaagtggagcaatcatgttttagcgttggct
gttagttctgatggccgctatttggctacagggggcctagatcgacatgtgcatttatgg
gatgttcgcacgcgggagcacattcaggcatttcctggtcatagaagacctgtgtcttgt
ttgatctttaggcagggaacgtcacaacttttttctggatcatttgatcgctctatcaag
atatggagtgctgaagatcgaagttaccttgggacatctcatggccatgagggtgaaata
ttagcgattgattgtctaagaaaggagcggacattgactgttggtcgtgatcgaacaatg
cgattgtcaaagatccccgaggaaacacatctaattttccgctcctcaactgcatccctg
gagagttgttgtttcatcagtaatgatgagttcttatctggctcagatgatggaagcata
gagctatggagcttattgaagaagaagcccatttttgttgtaagacatgcacattcaatg
ctagcccccaataccaacttaaatggagtctgtgatgagagaaaaatggttaatggtcac
tcagattacgaacattctgaggctggatttctaaaaccatcaactcagtcatgggttggg
gctgttgcagtctgcaggggcagcgatcttgctgcatctggagctggaaatggtcttgtg
cgtttgtgggctgtaggggatgaacaaagaataattagccctatacatgacgttccattg
aatggtttcgtgaattcccttgcattcgcaaaatctgggcgtttccttgttgctggagtg
ggacaggagcctcgtctgggaagatgggaccgcatttctgatgcacaaaatggggttgtg
ctgcaaccaatcaagctcatggtataa
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