Nymphaea colorata (blue-petal water lily): 116260046
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Entry
116260046 CDS
T07418
Name
(RefSeq) clathrin heavy chain 2
KO
K04646
clathrin heavy chain
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04142
Lysosome
ncol04144
Endocytosis
ncol05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116260046
04142 Lysosome
116260046
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116260046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116260046
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncol04147
]
116260046
Membrane trafficking [BR:
ncol04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116260046
Exosome [BR:
ncol04147
]
Exosomal proteins
Proteins found in most exosomes
116260046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
116260046
NCBI-ProteinID:
XP_031493982
LinkDB
All DBs
Position
9:2961531..2980261
Genome browser
AA seq
1708 aa
AA seq
DB search
MAAASAPIAMKEALTLTSLGINPQFITFTHVTMESDKYICVRETSPQNSVIIIDMNMPNQ
PLRRPITADSALMNPNSRILALKAQIPGATQDHLQIFNIELKAKIKSYQMPEQVVFWKWI
TPKLLGLVTQASVYHWSIEGESEPVKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVEQQRSQALEAHAAAFASFKVPGNDNPSILICFATKTMNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVSMQISHKYSLIYVVTKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAEASSVGGFYAVNRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFSQTKYKEAAELAAESPQGILRTPDTIAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPDHAYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYMRALQHYTDLSDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSMSEDPIIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLSQFLEHLVNEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMEPDLWDKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNSNLQNLLILTAIRADKSRVMDYVNRLDNFDGPAVGEIAVEAELYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFALRVEEEAVWSQLAKAQLREGLVSDAIE
SFIRAEDATEFLDVINAAEQVNAYQDLVRYLLMVRQKTKEPKVDGELIYAYAKIDKLGEI
EEFILSPNVANLQTVGDRLYDEALYEAAKIIFSYISNWAKLACTLVKLKQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSDYYQNRGCFDELISLMESG
LGLERAHMGIFTELGILYARYRPDKLMEHIKLFSTRLNIPKLIRVCDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLHVL
ALKVDHTRVVDIMRKAGNLHLVKPYMVAVQSNNVAAVNEALNEIYVEEEDYERLRESIDM
HDNFDQIGLAQKVEKHELLEMRRIAAYIYKKAGRWQQSVALSKKDNLYKDAMETCSQSGN
RELAEELLAYFIEKGKKECFAACLFICYDLIRPDVALELAWMNNMIDFTFPYLLQFIREY
TSKVDELIKDKLEALQEEKSKEKEEKDLVAQQNMYAQLLPLALPAPPSMGGMGGGFQPPP
MGMPPVGGMGMPPMPAFGMPPMPPMGGY
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctagcgcgccgatcgcgatgaaggaggctctcacgttgacaagcctcgga
atcaatccccagtttatcacatttacacacgtgacgatggaatcagacaagtacatctgt
gtgcgagaaacatccccacagaatagtgtgattatcattgatatgaatatgcccaatcaa
ccgctgagaaggcctattaccgctgattcagcattgatgaacccaaatagcagaatctta
gctcttaaagctcaaataccgggagctactcaggaccacctccaaatattcaatattgag
ttgaaggctaagatcaaatcctatcagatgcctgagcaggttgtcttctggaagtggatt
actccaaaattattgggattagttactcaagcctcagtctatcactggtctatagaaggt
gaatcggagcctgtaaagatgtttgatcgaacagctaatctggccaacaatcaaataatc
aactatcggtgtgacccatctgaaaagtggcttgtcttaattggaatcgcacctggtgca
ccagaaaggcctcaacttgttaaggggaacatgcagctcttttctgtagagcaacagcgt
agtcaagctctggaggctcatgctgctgcatttgcaagttttaaagtacctggaaacgat
aatccttctattcttatctgctttgccaccaagacgatgaatgcaggccagattacttca
aagttgcatgtcattgaactcggtgcacaaccagggaaaccgagcttcacaaagaagcaa
gcagaccttttctttcccccagactttgctgatgactttccagtttccatgcagatatca
cataaatatagtttgatttatgtggttaccaagcttggacttctttttgtgtatgacctt
gagactgctgctgcagtttacagaaatcgaattagtccagatccaatatttttgactgca
gaagcctcatcagttgggggattttatgctgtcaatagaagagggcaagtattacttgct
actgttaatgaggcaactattattcctttcatcagtggtcagttgaacaatctggagcta
gcagtaaatcttgcgaagaggggaaatcttccaggtgcagaaaatttggttgttcaacga
ttccaagagttattttcccaaacaaagtacaaggaggcagctgagcttgctgcagaatct
cctcaaggaattctgcgcactccagatactatagcaaaatttcagagtgttcctgtgcaa
gctggacaaactccaccactgctccagtattttgggacattattgacaaaaggcaagctc
aatgcatttgagtcacttgagttatctcgcttggttgtgaaccagaacaagaagaatctt
ctagaaaattggttggctgaagacaagcttgagtgcagtgaggagttgggggaccttgtg
aagactgtggacaatgatcttgcactgaagatctacattaaggcaagggctacccccaaa
gttgtagctgcttttgctgagaggagggagtttgataaaatacttatttactccaagcaa
gttggttataccccagattatctctttcttctacaaactattttgagatcggaccctcag
ggggctgtcaattttgcacttatgatgtctcaaatggaagggggttgcccagttgattac
aacacaattacggatcttttcctgcagagaaatatgataagagaagcaacagcgtttctg
ttggatgtcttgaagccaaatttgccagaccatgcataccttcagacaaaggtattggaa
atcaatctagtcacatttccaaatgtggctgatgctatcttagcaaatgggatgttcagt
cattatgatcgtcctcgaatagcacaactatgtgaaaaagctggcctttatatgcgagcc
cttcagcactacactgatctgtctgatatcaaacgtgtgattgtgaatacacatgccatt
gagcctcagtcacttgtagaatttttcggcacactctcaagagagtgggcattggaatgc
atgaaagacctcctgttggtgaatctcaggggcaatcttcagattatcgttcagacagcg
aaggaatactcagaacagctaggggtggatgcatgtattaagctatttgagcagttcaaa
tcctatgaagggctttactttttcctgggctcatatttgagtatgagtgaggatcctatt
atacatttcaagtacatagaagcagcagcaaaaacaggccaaattaaggaggtggagcgt
gtgacaagggaatctaatttctatgatcctgagaagacgaaaaacttccttatggaggct
aaacttccagatgcacgtcctctcataaatgtctgtgaccgctttggtttcgtacctgat
ctcacccactacttatactcaaacaacatgttgcggtatattgaaggctatgtacagaaa
gtgaatcctggcaatgcgcctttagtggtaggccagcttttggatgatgaatgccctgaa
gatttcatcaagggccttattctttctgttcgttcccttcttccagttgagccacttgta
gacgagtgtgaaaagaggaatcgcctccgtttgctttctcagttcttagaacatctggtg
aatgaaggaagccaggatgttcatgtccataatgctcttgggaagatcatcattgacagc
aacaacaatccagaacacttcctcactactaatccttactatgattcacgagttgttggt
aaatattgtgagaaaagggatcctacccttgccgttgttgcttataggcgtggacaatgt
gatgatgagcttatcaatgtcacgaacaaaaattctcttttcaagcttcaagcaaggtat
gttgtggagaggatggaaccagacctttgggacaaagttcttaaccctgaaaatgagtat
cgccgccagcttatagaccaagtggtgtcaactgctttgcctgagagcaagagcccagaa
caagtatctgcagcagtgaaagcatttatgactgcagaccttccacatgaacttattgag
cttcttgagaagattgttcttcaaaattctgcatttagtggaaattccaacctgcagaac
ctgctgatccttacagctattagggctgacaaatcacgagtcatggattatgtgaacagg
ctagataattttgatggccctgctgttggagaaattgctgttgaagcagaattatatgaa
gaagcatttgctatatttaagaaattcaacctgaatgtacaggcagtgaatgttctgctg
gataatatccgaagcattgatcgtgcagttgagtttgctctccgtgttgaagaagaagct
gtttggagccaactggctaaagctcaattgagggaaggactcgtcagtgatgctattgag
tcatttatccgtgctgaggatgctaccgagttcctggacgtgatcaatgcagcagaacag
gtgaatgcataccaggacttggttaggtatcttctcatggttaggcagaaaacaaaagaa
cctaaggtggatggcgagctcatttatgcttacgcaaagattgataaattaggagagatt
gaagaatttattctttcaccaaatgttgctaatcttcaaactgtgggagatcggctatat
gatgaagcattatatgaagctgctaagattatattctcatatatctcaaattgggcaaaa
cttgcatgtacccttgtgaaattgaaacaattccaaggtgctgttgatgctgcgcgtaaa
gctaacagttcaaagacttggaaggaagtttgctttgcttgtgttgatgcagaggagttc
cgcctggctcaaatttgtggtctcaacattatagtacaggtggatgacttggaagaagtc
agtgattactatcagaacagagggtgctttgatgagctcatcagcctcatggagagtggt
ctcggtctggagcgggcacatatggggatatttacagagttgggtatcttgtatgcaaga
tatcgtccagacaaacttatggaacatatcaagctgttctccacaaggcttaacattcca
aagcttatccgtgtatgtgatgagcaacagcactggaaagaactcacatacttgtatatt
cagtatgatgagtttgacaatgctgccacaacaatcatgaatcattctcctgaagcatgg
gaccatatgcaattcaaagatgtggctgtcaaagtcgccaacgtggagctgtactacaaa
gcagtgcacttttacttgcaggagcatcctgacctaataaatgatcttcttcatgttctt
gctcttaaggtggaccacacacgtgttgttgacataatgcgaaaggcaggaaacttgcat
cttgtcaaaccatacatggttgcggtacaaagcaacaatgttgctgctgtaaatgaagct
cttaacgaaatttatgttgaagaggaggattatgaaaggctacgtgaatcaattgatatg
catgataactttgaccaaattggccttgcacagaaggttgagaagcatgagctccttgag
atgcggagaattgcagcttacatatataagaaggctggtagatggcagcaatcggttgca
ctatctaagaaggacaacctctacaaggatgcaatggagacatgttctcagtctggaaac
cgtgagcttgcggaagagttgctggcttacttcattgagaaggggaagaaggaatgcttt
gctgcatgcttgtttatatgttacgacttaatccgtcctgatgttgctcttgagcttgcc
tggatgaataacatgattgatttcacattcccataccttctacagttcattcgtgagtat
actagcaaagtagatgaactaataaaggacaagctggaagcgctgcaagaagaaaagtcc
aaagagaaggaggagaaagatttagtagcccaacagaacatgtacgcacagcttcttcca
cttgcattgcctgcaccaccatccatgggtggtatgggaggaggattccagcccccaccg
atgggaatgccaccggtgggtggcatgggaatgccaccgatgcctgctttcgggatgcca
ccaatgccgcctatgggtgggtactga
DBGET
integrated database retrieval system
