Nymphaea colorata (blue-petal water lily): 116260316
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Entry
116260316 CDS
T07418
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116260316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116260316
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116260316
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
116260316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
116260316
NCBI-ProteinID:
XP_031494424
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All DBs
Position
9:complement(1020872..1029282)
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AA seq
305 aa
AA seq
DB search
MEFDNIECISSSDGIDEDEPSFSKPHVPSTISPATSVHELLECPVCTNSMYPPIHQCHNG
HTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYTHGCPEIFPYYSKLKH
EAQCNFRPYNCPYAGSECSVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENA
TWMLTVFYCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDDNEARNFSYSLEVGANGRKLTW
EGIPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNQDAGACI
PNLCS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgataacatagagtgcatctcgtcctccgatgggatcgacgaagacgagccg
tccttctcgaagccgcatgtcccctccacgatctcccccgctacgagcgtccatgaactc
ctggaatgcccagtctgtaccaattccatgtacccaccaattcatcagtgccacaatggg
catacgctctgctctacatgtaaatcaagagtccataataggtgtccgacatgtagacag
gagcttggagacattcggtgcctagctttggagaaggtggcagagtcacttgaacttccc
tgcaagtactacacacatggctgcccagagatatttccatactacagcaagcttaaacat
gaagctcagtgcaacttcaggccatacaactgtccatatgcaggctctgaatgctctgtt
gttggagacattcccttccttgtttctcatctgagagatgatcataaagttgacatgcat
actggatgcacgttcaatcatcgctatgtcaagtccaatccacgtgaagttgaaaatgca
acttggatgctgacagttttctattgtttcggacaatatttctgcttgcattttgaagct
ttccaacttgggatggcaccggtatacatggcattcctgcgcttcatgggtgatgacaac
gaagccaggaatttcagctacagtcttgaggttggtgctaacggaagaaagttaacatgg
gaaggcattcctaggagtatcagagatagccaccggaaggtccgggacagccatgacggt
ctgattattcaaaggaatatggcacttttcttctctggaggggatcggaaagaactaaaa
ctacgagtcacgggcaggatatggaaggagcagcagaaccaagatgcaggtgcatgcata
ccaaatctctgtagctaa
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