Nymphaea colorata (blue-petal water lily): 116260337
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Entry
116260337 CDS
T07418
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116260337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116260337
Membrane trafficking [BR:
ncol04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
116260337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
116260337
NCBI-ProteinID:
XP_031494452
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Position
1:complement(26472103..26483124)
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AA seq
792 aa
AA seq
DB search
MMQSDGSEDQEKWLAEGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSRLSPHK
YYELYMRAFDELRRLEMFFREEIKRGCSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDVLKDLVEMCRGVQHPIRGLFLRSYLSQISRDKLPDIGSEYEGGADTVIDAVEFV
LQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQLEGVDLDMYKETVL
PRVLEQVVNCKDEIAQYYLMDCIIQVFPDEYHLQTLETLLDACPQLQPTVDIKTVLSQLM
ERLSNYAAASTEVLPEFLQVEAFAKLSAAIGKVIEAQPDMPIVGAITLYVSLLTFTLRVH
PDRLDYVDQVLGACVKKLAGKGKIDDSRATKQVVALLSAPLDKYNNIVTALKLSNYPRVM
DYLDYGTNKVMAVFIIQSIMKNNTQISNSEKVEALFELMKGLIRDIDGTPDDEQLDEEDF
KEEQNSVARLIHMLMNDDHEEMMKIITTVKKHVLQGGPRRLPFTIPPLVFSALKLVRSLQ
GQEGQGASEEGDVTPKKIFQLLTQIIEALSLVPSPELALRLYLQCAEAANDCELEPVAYE
FFTQAFILYEEEIADSKAQVTAMHLIIGTLQRMNIFGVENRDTLTHKATGYSAKLLKKPD
QCRAVYACSHLFWVDDQDGAKDGERVLLCLKRAIRIANAAQQMANVTRGSSGPVTLFVEI
LNKYLYFFEKGNPQITSTVIQGLIDLITNEMQSDNIAPDRSADAFFASTLRYIQFQKQKG
GTMGEKYGPIKV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaatcagacggctcagaagaccaggagaaatggctcgcggaggggatcgccggc
ctgcagcagaactccttctacatgcaccgcgccctcgactcgaacaaccttcgggatgcg
ctcaagtactcggcgcagatgttatccgagctccggacgtcgcgcctctcaccgcacaaa
tactatgaactttatatgagagcgtttgatgagttgcggagattggagatgttcttcagg
gaggaaattaagcggggctgctctattgtggacttgtacgagctcgtgcagcacgctggg
aacattctgcctagattgtatctgctctgcacggtaggatcagtgtacatcaagtcaaaa
gaggctcctgctaaagatgtgctgaaagaccttgtggagatgtgtcggggagttcagcat
cctatacgtggtcttttcctgagaagttatctttctcaaataagtagagacaaattacct
gacattggatctgaatatgaagggggtgctgacactgttattgatgctgtggagtttgtg
ttacaaaatttcaccgagatgaataaactttgggtgcgcatgcaacatcagggacctgcc
agggaaaaggagaaaagggagaaagaaaggagtgagcttcgggaccttgttgggaaaaat
ctgcacgttctcagtcagttagagggtgttgaccttgatatgtacaaagaaactgtactg
ccaagagttctcgagcaggttgtcaattgtaaggatgagattgcacaatattacctgatg
gattgtatcatccaagtcttcccagatgaatatcacttgcaaaccttggaaacattgctt
gatgcctgcccgcagcttcagccaactgtcgacatcaaaacagtgttatctcagttaatg
gaaagattatccaattatgcagctgcgagcacagaagttttacctgaatttttgcaagtt
gaagcatttgcaaaattaagtgctgccattggtaaggtcatagaagcacagccagacatg
cctattgttggagctataactctctacgtatcacttcttacatttactctaagggttcat
cctgaccgacttgattatgttgaccaagtactgggtgcttgtgttaaaaaacttgctggc
aaagggaagattgatgatagcagagcgacaaagcaagttgttgcacttctgagtgctccc
ttggataagtacaacaatattgttactgcactgaagctctccaattatccacgagtcatg
gattaccttgactatgggacgaataaagtcatggctgtgtttattatccaaagcatcatg
aagaataatacacaaatatcaaactcagaaaaagttgaagcactatttgagctaatgaag
ggtctgatacgagatattgatggcactcctgatgatgagcagcttgatgaagaagatttc
aaggaggagcaaaattctgtagcccgactcatacacatgttaatgaatgacgatcatgag
gaaatgatgaagatcataactaccgtaaaaaagcatgtcctccaaggtggtccaaggcgg
ctccctttcaccattccaccccttgtattttcagctcttaagttggtaagaagcttacaa
ggtcaagaagggcaaggagcaagtgaagagggggatgtgacaccaaagaaaatttttcag
ttattgactcagataatagaggctttgtcactagtgccttctccagaactggcattaagg
ttatatttgcagtgtgcagaggctgcaaatgattgtgaacttgaacctgttgcatatgaa
tttttcactcaagcattcattttatatgaagaagaaattgcggattccaaggctcaggtg
acagcaatgcatctcattatagggacacttcagaggatgaacatatttggagtggagaat
agggacactcttactcacaaagccactggctactcagctaaactgttgaagaagcctgat
caatgtcgtgcagtttatgcttgctcgcatctcttctgggttgatgaccaggatggtgct
aaggatggagaaagggttcttctgtgtttgaagcgtgcaatacggattgcaaatgctgct
cagcagatggcaaatgtgacacgtggaagcagtggacccgtcacattattcgttgagatt
ctgaacaagtatctgtatttctttgagaaaggaaatccccagatcacgagcacagtaatc
cagggattaattgacttaataactaatgagatgcaaagtgacaacattgccccagatcga
tcagctgatgctttctttgctagtactctccgctatattcagttccaaaaacagaagggt
ggtacgatgggggagaaatatgggcctatcaaagtgtga
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