Nymphaea colorata (blue-petal water lily): 116260422
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Entry
116260422 CDS
T07418
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116260422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116260422
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116260422
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
HECT type E3
116260422
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
TFIIA
UNC45-central
HEWD
Motif
Other DBs
NCBI-GeneID:
116260422
NCBI-ProteinID:
XP_049935414
LinkDB
All DBs
Position
9:24425542..24438691
Genome browser
AA seq
1885 aa
AA seq
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METRSRKRAEASSAAPSNPSSSTPVLRSSKRARLSASTSAASPPVTRSRHNLRSQDPPMD
SSNTESSGSRRRHHHHQKQPAGGGDREKDSAEKGKEKEPDPRHLGFGFDAAGGDDDDGEG
VSILHQNLTTASSALQGLLRKLGAGLDDLLPSSAPSSSQQSGRLKKILSGLRADGEEGRQ
VEALTQLCEILSIGTEDSLSSFSVDSFVPVLVGLLNHESNADIMLLAARALTHLCDVLPS
SCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALEKISHEHPTACLRAGALMAVLSYLDF
FSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLHYHDSKVLDHASVCLTRIAES
FAQAPDKLDELCNHGLVAQAAGLISVSNSGGGQASLSTPTYTGLIRLLSTCASGSPLASK
TLLLLGISGTLKDILNGCNLAASMFVSPALARPPEQIFEIVNLANELLPPLPQGTISLPN
SSSFFGKGLVGKRSFSGSTTKQEDANGASSDASVRERLFHEQPELLQQFGMDLLPVLVQV
YGSSVNSPIRHKCLSVISKLMYFSTSSMIQSLLTVTNISSFLAGVLAWKDPQVLIPAIQI
AEILMEKLPDTFSKMFVREGVVHAIDALISMSGSDMVPQPSPAEKEQDALPSSRSRRYRR
RSGASNPEANALEESKGSVSIGSPPAAIEVPTANSSLRATVSACAKSFKEKFFPADPGAT
DTAVTDDLLKLKNLCAKLNASVIDFKGKAKGKSKASGHVLTDLSADTEEHLIGIISELLG
ELSKGDGVSTFEFIGSGVVAALLNYFSCGTFSKEMLSETSLTKLRLQALKRFKLFIAIAL
PSGFKTTTEAPMTILVQKLQNALTSLERFPVILSHSSRSSSGSARLSSGLSALSQPFKLR
LCRAQGDKTLRDYSSNIVLIDPLASLAAVEEFLWPRVQRNESGQKTSAPVANSEPAASPA
SGGASSPSTYAPPASGRRHSTRSRSSSVAVGDSTKKETHEGHASSSKGKGKAILKSSADE
SQGPQTRNAARRRASSEKDTQLKVAPGGSSSEDDELDISPVEIDDALVIEDDDVSEDEDD
DHDEVLGDDSVSICVSDKVHDVKLGDTPEDTTVAPALADTQVPPLSGSSNRSVSIRGTET
TEFRSGSPFGSRGAMSFAAAAMAGLASASGRGGIRASRDRRGLPIVGSSSDPPKLIFSVG
GKQLNRHLTIYQAIQRQLVLDEDDDERFNGTDSLPSDGQRLWYDIYTITYQRADAQAERS
SIGASASNSQSKSSRSGSASNTSPDASKQQKSLLDSILQGELPCDLEKSNPTYSILALLR
VLEGLNQLSTRLRIEAATDVFAEGKISSFDELFGTGARVPVEEFINSKLTPKLARQIQDP
LALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQQQSADNHGSSNE
REVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLL
SHELQKVGLGMWRSSSEVDKSEMDMDNDDKVVEKVDEAYDAKKLGRDTAAGDAELVHAPL
GLFPRPWPPSSDASDGSQYSKIIEHFRLIGRVMAKALQDGRLLDLPLSTAFYKLVLGQEL
DLHDILSFDVDLGKILQEMHALVRKKQYLESLSGDNQKQISELCFRGAPMEDLCLDFTLP
GYSDYVLKQGGDNTMVDIYNLEEYISLVVDATLKTGIMRQLEAFRAGFNQVFDISSLQIF
SPNELDCLLCGRRELWKADSLVDHIKFDHGYTAKSPAIINFLDIMGEFTPEQQRAFCQFV
TGAPRLPPGGLAVLNPKLTIVRKHASSATSMASNGTATAESADDDLPSVMTCANYLKLPP
YSTKEIMYRKLLYAISEGQGSFDLS
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcggagccggaagcgggcggaggcctcctcagcagcgccctctaacccttcg
tcgtcgacccccgtccttcgctcatccaaacgcgcccgcctttctgcctcgacctctgcc
gcctcgcctccagtcacgcgctcccgccataatttgcgttctcaagacccgcctatggac
tccagcaacacggaatcgtctggttcacgccgtcgccaccaccatcatcagaaacagcct
gctggcgggggcgaccgggagaaggattcggctgagaaggggaaggagaaggagccggac
cctcggcacctagggtttggttttgacgcggccggcggggatgacgacgatggcgagggc
gttagcatcctgcatcaaaacctgactactgcgagcagcgcgcttcagggccttctcagg
aagctgggcgccggactcgatgatctcctcccttcgtcagcaccgtcgtcgtcgcagcag
agcgggaggttgaagaagatcctctccgggctgagggctgacggcgaggaagggcggcaa
gtggaggccttaacgcaactttgcgagatactgtcaattgggaccgaggattcgttgagc
tcgttctctgtggactccttcgtgcccgtgctcgttgggctgctcaatcacgagagcaac
gccgatatcatgcttcttgctgctcgcgcattgacacacctgtgcgacgttctcccgtcc
tcttgtgccgccgtcgttcactatggcgctgtctcgtgtttctgcgcccgattgctcacc
attgaatacatggatttagcggaacagtcgctgcaagctctggagaagatttcacatgaa
catccaacagcgtgcttgcgtgctggcgcattgatggcggtgttatcatatctcgacttc
ttttcaactggagttcagagagttgcattgtctactgctgcaaatatgtgcaagaaactt
ccatctgatgcagcggactttgttatggaagctgtaccgctgcttacaaatctccttcac
tatcacgattcaaaggtgctagatcatgcttctgtttgcttgacccgtattgccgagtcg
tttgcacaggcacctgacaaactagatgaactttgcaaccatggattggttgcacaagct
gcaggtcttatttcagttagtaattcaggaggcggtcaggcttcacttagtacaccaaca
tacacgggtttgattcgcttgctgtcaacttgtgcaagtggctctcctcttgcatctaaa
acccttttgcttcttgggataagtggcactctgaaagatatactgaatggttgtaacttg
gctgcaagcatgtttgtatcacctgctttggctaggcctcctgaacagatatttgagatt
gtgaaccttgccaatgagcttcttcctccacttccacaaggcacaatttctcttccaaac
agctcaagtttttttgggaaaggtttggtaggaaaaaggtccttttctggcagcactaca
aagcaggaagatgctaatggagcctcttctgatgcttctgtgagagagagattattccac
gagcaacctgaacttctccaacagtttgggatggatctacttcctgtattagtacaggtt
tatggatcgagtgtgaatagcccaattcgtcataagtgcctctctgttattagcaagttg
atgtatttcagtacatctagcatgatacagtcattattgacagtgacaaacatttctagt
ttcttagcaggtgtcttggcatggaaagatcctcaagttttaattccagctattcaaata
gctgagattctgatggaaaaacttcctgatactttctctaagatgtttgtaagggaaggt
gttgttcatgccatagatgcccttatttcaatgagtggctcagatatggttcctcaacca
tcaccagctgaaaaagaacaggatgccctgccttcatcacgttctcgccgttacaggcga
cgtagtggtgcttctaaccctgaagctaatgctctcgaggagtcaaaaggttctgttagt
attgggtcacctccagctgccattgaggttccaacagcaaattctagccttcgtgcaaca
gtcagtgcatgcgcaaaatcattcaaagaaaagttcttcccagctgatcctggggcaact
gatactgcagtaacagatgacctgttgaaattgaaaaatctttgtgcaaaattaaatgca
agtgtcatagacttcaaaggtaaggctaagggcaagtcaaaagcttctggtcatgtttta
accgacttatctgcagatactgaagaacacctcataggtattatatctgaactgttggga
gagctgagcaagggtgatggagtatcaacatttgagtttattggtagtggggttgttgca
gcgctattgaattacttttcttgtgggacattctcaaaagagatgctctctgaaaccagc
ttaaccaagcttcgcctgcaagccttgaaaaggttcaagctgtttattgcaattgctctc
ccctctggttttaagacaactactgaggcccctatgactattttagtccaaaaattgcaa
aatgcattaacttcattggaacgctttcctgtcattctcagccactcatctcgctcttct
agtggtagcgcacgcctttcttcggggttaagtgctctgtctcaaccatttaagttgcgc
ctatgtcgtgcacaaggtgataaaactctacgtgattattcttcaaacattgtgttgatt
gatcctctggcgagtttggcagctgttgaggagtttctttggcctagagttcagagaaat
gaatcaggacagaagacttctgcacctgtggcaaattctgaacctgctgcatcacctgct
tcaggtggtgcatcatcgccatctacatatgctcctcctgcatctggtcgacgccattct
actagatcaaggtcgtcgtcagtggcagtaggagattctaccaagaaggaaacccatgaa
ggtcatgccagttcatccaagggcaagggtaaagctattcttaaatcttctgctgacgaa
tcacagggtccacagactagaaatgctgcacgcagaagggcatcttctgagaaagataca
caactgaaagtagcacctggtggttctagctctgaggatgatgaattggacatttcacct
gttgagattgacgatgctttggttattgaagatgatgatgtctcagaagatgaagatgat
gaccatgatgaggttctaggtgatgattcagtttctatctgtgtatccgacaaggtacat
gatgtgaagctgggagatacacctgaggatacgacagttgcaccagctttagctgacacc
caggttcctccattgtctggttctagcaacagaagcgtctctatcagaggaacagagact
actgagtttagaagtggtagcccctttggttctagaggggctatgtcttttgctgctgct
gcaatggctggtcttgcctctgctagtggtagaggtggcattagggcaagtcgagatcgt
cggggacttcccatagttggcagctcaagtgatcctccaaaactgattttctctgttggt
ggtaaacagctaaacagacatcttaccatatatcaggccatccaacgccagcttgtattg
gatgaagatgatgatgaaaggtttaatgggactgactctctaccaagtgatggacagcga
ttgtggtatgacatatatacgatcacatatcaaagagctgatgcccaagctgagaggagt
tcaataggagcttcagcttctaattcacaatcaaaatcttctagatctggatcggcctct
aatacaagtccagatgcttcaaaacagcagaaatcacttcttgacagcatcctgcaaggt
gaacttccatgtgatttggagaaatctaaccccacatacagcattttggcattacttcgt
gtcttagaaggtttaaatcagctttctactcgcttgagaatagaagcggctactgatgtt
tttgctgaagggaagatatccagctttgatgagctttttggcactggtgcaagagttcct
gttgaggagttcattaatagcaaactgactccaaaattggccaggcaaattcaggatccc
ctggctttgtgcagtggaagtcttccttcttggtgctaccagttaactaaagcatgtccc
ttcttgtttccttttgagactaggcggcagtacttctattctactgcatttgggttgtcc
cgagcacttcatcggcttcaacaacagcaaagtgctgacaaccatggttcaagtaatgaa
agggaagtacgggttggtagactgcaacgccagaaagtccgtgtctctcgtaaccgcatc
ttagattcagcagcaaaggttatggaaatgtactccagccagaaggctgttcttgaagtg
gaatattttggtgaggttggtactggattaggcccgactctggagttttatacccttctt
agtcatgagttgcagaaggtgggattggggatgtggaggtctagttctgaagtggataag
tctgaaatggatatggataatgatgacaaggttgttgagaaagtggatgaagcttatgat
gcaaagaaacttggacgggatactgctgctggggatgcagaacttgtacatgctcctctt
gggttgtttcctcgtccatggcctcctagctctgatgcttctgatggaagccaatattca
aagattatagagcatttccgccttattggaagggtcatggcaaaggctttacaagatggc
aggctcttggaccttccactttcaactgctttttacaagcttgttttgggtcaagaactt
gatttgcacgatattctttcttttgatgtggacttgggaaagattttacaagagatgcat
gctcttgttcgtaaaaaacagtatctggaatcattgtctggcgataatcaaaagcaaatt
tctgaattatgctttcgtggtgctccaatggaagatctctgtcttgattttacccttcct
ggttattcggattatgttttgaagcaaggaggagataacacaatggttgacatttataat
ttagaagaatatatttctttggtggttgatgcaactcttaaaacgggaattatgagacaa
ctcgaagcatttagggctggcttcaatcaggtttttgatatatcatccctccaaatattc
tctcccaatgagctggactgcctactctgtggtcgtagggaattgtggaaggctgatagt
ttggttgatcacatcaaatttgatcatggatatacagctaaaagtcctgcaataatcaat
ttccttgacatcatgggagaatttacaccagagcaacagcgtgctttctgtcaatttgtc
actggtgcgcctaggcttccacctggtggtttggctgtcctaaacccaaaactgacaatt
gtgaggaagcatgcctcgagcgcaacgagcatggcatcaaatggtactgcaactgctgaa
tcagctgatgatgacttgccaagtgttatgacctgcgctaattaccttaagctgcctcca
tattccacaaaggaaatcatgtacaggaagctgctgtatgcaatcagtgagggacaggga
tcattcgacttgtcatga
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integrated database retrieval system
