Nymphaea colorata (blue-petal water lily): 116260462
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Entry
116260462 CDS
T07418
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116260462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116260462
03036 Chromosome and associated proteins [BR:
ncol03036
]
116260462
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116260462
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116260462
PBAF complex
116260462
GBAF(ncBAF) complex
116260462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
DTX3L_a-b
Myb_DNA-bind_7
Cytochrom_B562
Motif
Other DBs
NCBI-GeneID:
116260462
NCBI-ProteinID:
XP_031494682
LinkDB
All DBs
Position
9:14800709..14811155
Genome browser
AA seq
938 aa
AA seq
DB search
MAERSSVDARQQHSANALPHLHRETELMEGSRRRSGGQAKRKAANSSSSASSKRSAKERA
PPILPPLHNGPCTRARQSPNKFPGGSSAANKQEFSQGMQDVTEVLDDAQQKQEAEDQMHK
PLVDTELEAVRSRDANVHVIPVPAGWFSWTKVHPLEEKALSSFFDGKSETQTSEKYLELR
NLIMKKYHVNPQSQISLKDLSDLNIGDDKAKKEIMEFLSSWGLINFHPLPPPNTDITSNG
VDETAEVTSLVEKLCQFRMHPVAKVNRQKSLAAPTLVSGILPESAIPDALLPQEGPAVEY
HCNSCSADCSRKRYHCQKQADFDLCSECYTDGKFGSGMTSADFILMEPGTEMSGTSSGSW
SDQETLLLLEALELYGENWNEIAEHVATKTKAQCFLHFVRMPIEDVFIEREDTSDVTSPH
VPDSAAVDKDPPVAPATGSSLDPPKAASEQPDTPSEQVKNDSEPSQAENGTAGEQPTPLP
PPPPSDAVKPSDDGYVDDAQENHNFAIDALKAAFQAVGSSFEPGGSLSFADAGNPVMALV
GYLAALVDPDVSDASVRSSLKAFHEDSPGIQLASRHCFFLEDPPDSSEGLAACKSDTTEA
IEAEPHKEEKEASATEGGPICNDSTNKTDENVVTEAKDPSTSPQECTEKPDVANESNETE
STKEASSNLEDIKPMDIDPNSVRPMEEDAKATVASEKTVETNSNAVDNEMKTTVTTPETD
ANSCKVEDGPKDSKDAHPKDSNDAHPKDSNDAHPKDSKDAHVSAGSTDATASSKTSVCST
NATASSKVRRAAIAALSAAAVKAKLLADQEEEQIRQLCSFVIERQLHKLESKLGLFSDIE
RIYMRLREQIDRARQRLMLERNQIIAARFGLPASMPRMGFQSTQTLRSSMTNNAAFRGPM
KTFSSSSIIPGSSAGGSVPGLSQTSISSAGGNLGPAKS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcagagagaagcagcgtcgatgctcgccagcaacactccgccaacgccctccctcac
ctccacagagagaccgaactcatggagggttcaagacgcaggtcaggtggacaagcgaag
aggaaggctgccaattcttcgtcgtcggcttcttcgaagcgttccgccaaggaaagagct
ccgcctattcttcctcctttacacaacggcccttgcactagagcccgccagtctcctaac
aagtttcctggaggatcttctgctgcaaataagcaagaattctctcaagggatgcaggat
gtaacggaggtgctagacgacgctcaacagaagcaggaagccgaggatcagatgcacaaa
cccctggttgacacggagttggaagcggttagatcccgggatgccaatgtccatgtcatt
cctgtacctgctggttggttttcttggacgaaggttcatccactagaggagaaggctttg
tcctcattttttgatggaaaatccgaaactcaaacatctgaaaagtacttagaattgaga
aatctaataatgaagaagtaccatgtgaatcctcaatcacaaataagtttgaaggattta
tctgaccttaacattggggatgacaaagcgaaaaaagagataatggaattcttaagtagc
tggggtttgataaatttccatccacttccaccacccaacactgatataacttctaacggg
gttgatgaaactgctgaggtgacatctttggttgaaaaactctgccaatttcgcatgcat
ccagttgcaaaggtaaataggcagaagagcttggctgctccaactttggtgtctgggatc
cttccagaatctgctattccagatgcattgcttccacaggaaggtccagcagtagagtac
cattgtaactcttgctctgctgattgttctcgcaagcgttatcactgccagaagcaggca
gattttgatttgtgttctgaatgctatactgatggaaaatttggatctgggatgacatca
gctgattttatccttatggaacctggaacagaaatgtcaggcacaagtagtggaagttgg
tcagaccaggagaccctgcttcttcttgaagctctggagctttatggagagaactggaat
gaaattgctgagcatgttgccacgaaaaccaaggctcaatgtttccttcattttgtcaga
atgcctattgaagatgtttttatagaaagggaggacacttccgatgtaactagtcctcat
gtaccagattctgctgcagttgacaaagatccacccgttgcacctgctacaggaagttct
ttagatcctccaaaagctgcttcagagcagcctgacactccttcagagcaagtaaaaaat
gactcagaaccatctcaagctgaaaatggaacagctggtgagcagccaacaccactgcca
ccgccacctccttctgatgctgttaaaccaagtgatgatggttatgtcgatgatgctcaa
gaaaatcataattttgcaattgatgcattaaaggctgcatttcaggcagttggttcatca
tttgaaccaggaggttcactttcatttgcagatgctgggaatcctgtcatggcattggtt
ggttacttggcggccctggttgatcctgatgtgtctgatgcttcagtgcggagctctcta
aaagcatttcatgaggattcaccaggaattcagcttgcctccaggcactgtttcttcctt
gaagacccaccagacagcagtgagggtttggctgcgtgcaagagtgataccactgaagcg
attgaagctgagccccacaaggaagaaaaagaagcgtcagccacagaaggtggtccaata
tgcaatgactcaacaaataaaactgatgagaatgtggttacagaggcaaaagatccatcc
acatccccacaggaatgtacagaaaaacctgatgttgcaaatgaatcaaatgagacagaa
tcaaccaaggaagcttcatcaaatctagaggatataaaacccatggacatagatccaaat
tctgttcgtccaatggaggaagacgctaaagcaacagttgcttctgagaagaccgttgaa
acaaattctaatgcagttgacaatgaaatgaaaacaactgtgactactcctgagacggat
gctaactcttgtaaagttgaagatgggcctaaggattcaaaggatgcacatcctaaagat
tcaaacgatgcacatcctaaagattcaaacgatgcacatcctaaagattcaaaggatgca
catgtgagtgctggatcaaccgatgccactgcttccagtaaaaccagtgtctgctctact
aatgccactgcttctagtaaggtcaggcgtgctgcgattgctgcactttcagcagcagct
gtgaaggcgaaacttcttgcagaccaggaagaagagcaaattcgtcagctctgctctttt
gtcattgagaggcagttacataagttggagtccaagctgggacttttcagtgatatagaa
agaatatacatgagacttcgtgaacagatagacagagcaagacagagacttatgcttgaa
cgcaatcaaataatagcagcacggtttggtttacctgcctctatgcctaggatgggcttc
cagtcaacacaaactctaagatcttctatgaccaacaatgctgctttccgtgggccaatg
aagacattttcgtcatcttcaattattccaggttcatcagcagggggttcagtacctggg
ttaagtcaaacaagcatttcttctgctggaggaaatttaggacctgccaaatcatag
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