Nymphaea colorata (blue-petal water lily): 116260478
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Entry
116260478 CDS
T07418
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116260478
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116260478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Mt_ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
116260478
NCBI-ProteinID:
XP_031494718
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All DBs
Position
9:complement(12353979..12367692)
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AA seq
687 aa
AA seq
DB search
MWCKHCGRDQPGYTDEINGYTCCTGCGKVIDQDLFSSEVTFLKTSSGQSRVAGSFVKSVR
DSGSSESHERTLAKGRNEISDIVSGLEMSGGDSLIDQAHRLYTIAVERNFTRGRRTNQVA
ASCIYIICRLEKKPYLLIDFSEFLQINVYVLGAVFLQLCQLLRLVQHPIVQKPVDPSLFM
PRYASMLVTSKEMERKDMHTLCREISVTAVRIIASMKRDWIQTGRKPNGLCGAALYISAL
SCGISCSKSDVVNIVHVCDATLTKRLIEFENTESGSLTIDTFIEKAKEFEADVSRVTANV
GLGTQGSSEVLCEHKDRGATNFLHGLCRKCYDDFVEISGGIQGGSDPPAFQRAERERTLK
ASIDENNEGQSSQTVGDKPNMPHKDGKGSCSQAGSEFSASERMASSNSESADHVHVTEDP
TSSKKNLDGGEDGGDKENLMNKRSPENVAVDGNSPVKERQHEDVGNLEDDEAETLSDIDD
AEVDGYLHDEEETRLKTIIWTEMNKEYLEEQAAKAAAIAAAQAAYEANLSNCADMPGAFE
VAAMAAAAVAKFKKERQQKRAEEAKNNTPAQTAAEATRRMLTKKRLSSRINYDVLEKLFD
DTDKEQLHKNMDTTAKGDVKKQKIESAEIDGFSQPLDDVDDQAFKSDVFDGDGADIGGEY
GEYDTYSYHGNQSYGYSYDDQYGYDDY
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgtaagcactgcgggagagaccagcctgggtatactgatgagatcaatggctac
acatgttgtactggatgtggaaaggttattgatcaagatttgttctcctcagaagtaacc
tttctgaaaacaagttctggacaaagcagagtagcaggaagttttgtgaagagtgttaga
gattctggaagttctgagtcacatgaaaggactcttgcaaaaggtagaaatgaaattagc
gatattgtttctggccttgaaatgagtggtggagattcccttattgaccaagcacatcgg
ttatacacaattgctgttgagcgtaatttcaccagaggccgcagaactaatcaagttgca
gcatcatgcatttacatcatttgtcggcttgagaaaaaaccttacctccttattgacttt
tcagagttcttgcagataaatgtttatgtgctaggtgctgtatttttgcagctttgccag
ctattaagacttgtccagcacccaattgttcagaagcctgttgatccaagtctttttatg
cctcgatatgcatccatgctagttaccagcaaggaaatggaaaggaaagacatgcacaca
ttatgccgtgaaatttcagtcacagctgtgcgcattatagcaagtatgaaacgagattgg
atacagactgggagaaaacctaatgggttatgtggtgccgcattgtacatatctgcactt
tcatgtggtatcagctgttctaaatctgatgttgttaatattgttcatgtttgtgatgct
actttgacaaaacggctgattgagtttgaaaacacggagtctgggagcttgacaattgac
actttcattgaaaaagccaaggagtttgaggctgatgtttctagagtgactgcaaatgtt
ggccttggaacccaaggaagctcagaggttctctgtgaacataaagatagaggcgccact
aatttccttcatgggctatgcagaaagtgttacgatgatttcgttgaaatctctggtggg
attcagggaggatctgatcctcctgctttccagcgtgctgaaagagaaagaacactgaag
gcatcaatagatgaaaataatgagggccagagtagtcaaacagttggtgacaagccaaat
atgccccacaaagatggaaaaggatcatgctctcaagctggatcagagttttctgcaagt
gaaagaatggcctcaagcaattctgaaagtgctgatcatgtacatgtaactgaagatccg
acttccagcaagaagaatttagatggtggagaggacggtggagataaagaaaatttaatg
aacaaaagaagcccagaaaacgtggctgttgatgggaattctcctgttaaggaacgtcaa
catgaggatgttggaaatctggaggatgatgaagccgaaacactttcagatatagatgat
gcagaagttgatggttaccttcatgatgaagaagaaacacgcctgaagactatcatttgg
actgaaatgaacaaggaatatcttgaggagcaagcagctaaagcagcggctattgcagct
gctcaagcagcttatgaggccaatctctcaaattgcgcagacatgcctggggcatttgaa
gtggcagcaatggcagctgcagcagttgcgaagtttaaaaaggaaagacaacaaaagcgt
gctgaagaggccaaaaataacacccctgctcaaactgctgcggaggccactcgtagaatg
ttaacgaagaagaggctcagttcaaggattaactatgatgtactagaaaaactttttgat
gacacggataaggagcagttgcataaaaatatggacaccacagccaagggagatgtgaaa
aaacaaaagattgaatcagcagaaattgatggtttctctcaaccattggatgatgtggat
gatcaagcgttcaagtctgatgtttttgatggtgatggagccgatattgggggtgaatat
ggagagtatgatacatattcatatcatggaaatcaaagttatggctatagttatgacgat
cagtatggatatgatgattactga
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