Nymphaea colorata (blue-petal water lily): 116260494
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Entry
116260494 CDS
T07418
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116260494
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncol01002
]
116260494
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116260494
04121 Ubiquitin system [BR:
ncol04121
]
116260494
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116260494
Peptidases and inhibitors [BR:
ncol01002
]
Metallo peptidases
Family M67
116260494
Membrane trafficking [BR:
ncol04131
]
Endosome - Lysosome transport
Others
Others
116260494
Ubiquitin system [BR:
ncol04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
116260494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
SET1_RBD
Mrpl_C
Motif
Other DBs
NCBI-GeneID:
116260494
NCBI-ProteinID:
XP_031494739
LinkDB
All DBs
Position
9:19067826..19076610
Genome browser
AA seq
432 aa
AA seq
DB search
MANFLCSVAKVEVDNRLPISYYFRMASHMIKQAKVYRDEHNVVDLYVILLKYSSLVTETI
SQHQNYRHCSNTEKMHHKKVLKEFEKELAVLRPLVKQKLDGTNRHNTIEISKDKSGSGNS
CLSHRRKDHSGFTGHSFKGEYPTRAGSFSHLNHRDGSDILINKLSTSRSHCSEESTSAED
AELASVVLVDTPSNNLLYEAPCLTSIAAGDHDINVHIVRQPRPSPVLSCIQRLPDAETKG
NLQLTADDVSGSQGIKTVHISVRLVQDFLELARGNTENNLETCGVLGAFLANRMYYVTCL
IIPKQKSTSDSCQTENEEEIYSIQDQQSLFPLGWIHTHPSQSCFMSSIDLHTHYSYQTML
PESIAVVLAPTDSSRNYGIFRLTEPTGTTVLRKCQETGFHVHEDPSDGSPLYEDCSHVYM
NPNLRFEIVDIR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggctaatttcctttgttctgtcgcaaaagttgaggtcgacaatcgcctcccaatctct
tactacttcaggatggcttctcacatgatcaagcaggccaaagtttacagggatgaacac
aacgtcgtcgatctttatgtcattcttctgaagtattcaagcctggtaacagagaccata
tctcagcatcaaaattatcgtcattgctctaacactgaaaaaatgcatcacaagaaggtt
ctgaaggagtttgaaaaggaactggcagttctgaggcccttggttaagcagaaactagat
ggcaccaacaggcataatactatagagatatctaaagacaagagtggtagtggtaactct
tgtttaagccacagaaggaaggatcattctggtttcacgggccatagtttcaagggagaa
tatcctacaagagctggttccttttcacatctaaatcacagagatggttcagatatctta
atcaacaaattatccacatcaaggagccactgttctgaggaaagtaccagtgctgaagat
gcagaactggcatctgttgttttagttgacacgcccagtaacaacttgctgtacgaagct
ccttgtttaacttctattgcagctggggaccatgatattaatgtccacattgtgaggcag
ccacgtccatctccagttctttcctgcatacaaagactccctgatgctgaaacaaaaggg
aatctgcaattgactgcagatgatgtgtcgggttctcaaggaattaagactgtacatata
tcagtgaggttggtgcaagactttttggaacttgcacgagggaacactgagaacaactta
gaaacgtgtggtgttcttggtgcttttcttgcaaacaggatgtactatgttacctgcttg
ataatccccaaacagaaatcaacttcagactcttgccaaacagaaaatgaagaggaaatt
tattcaatacaggatcagcaatctctgtttcctctaggctggatacatacacatccctct
cagtcatgctttatgtcatctatagatctgcatactcactactcttatcagacaatgtta
ccagaatcaattgcagtcgtcctagcaccaactgattcatcaaggaactatgggattttt
cgactaacagagcctactgggacaacagtcttgaggaagtgtcaggagacgggatttcac
gttcatgaagatcctagtgatgggagtcccctctatgaggattgttctcacgtatacatg
aatccaaatctgaggtttgaaatcgttgacatccggtaa
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