Nymphaea colorata (blue-petal water lily): 116260735
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Entry
116260735 CDS
T07418
Name
(RefSeq) plant-specific TFIIB-related protein 1 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116260735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116260735
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
116260735
Prokaryotic type
Archaeal type
TFB
116260735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_5
HTH_Mga
DUF7342
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
116260735
NCBI-ProteinID:
XP_031495042
LinkDB
All DBs
Position
9:complement(14760801..14787953)
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AA seq
527 aa
AA seq
DB search
MSHPVRCPYCLGAQGRCTTLPSSGRAVTECASCGRVVEEHQSYAHDLFVLRAQDSPLCVV
TPDVAQLPLPPLDSDDAECDPFENTGFITAFSTWSLELHPVFAHTTTSFSGHLAEMERVL
QFDSADPSASLVDNLRAYLQIVDVSSILGVDRDISDHAVQLFRDCASTTCLRNRNIEALA
TAALLQAIREAQEPRTLQEISAAANVAQKEIGKYLKFLVEALKLSQPINSNSISVHMPRF
CTLLQLDKSTQDLATYIGEVVTNKCFCTRRNPISISAAAIYLSCQLEDKRKTQAEICKVT
GLTEVTLRKVYKELLENRDDLLPPDYTPAVPLDKAFPMTTVASGRSTSLKPDVVDLSSSS
TGQAKLLNDTTKPRKIQEGTEGDQHQQAGKGKEKEAEYRDAALRGSPLTERANNNDPGAL
QWQSSLLFRMPALRESGSSTRPERDIDINEAQPCSREEGDCKHKGAGSGNSGGFLPGSGW
RFSASRSTEAHAPPVYQKLTAGLIGHVDQLQVKKGNLPGVEGKSHRK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcccgtccggtgcccctactgtttgggcgcgcaagggaggtgtacgacgttg
ccgtcgtcggggagggcggtgacggagtgcgcgtcgtgtgggcgggtggtggaggagcac
cagtcctacgcccacgacctgtttgtcctccgggctcaggactcccctctctgcgtcgtt
acccctgatgtggcccagctgccgctcccgccactcgacagtgacgatgccgaatgcgac
cccttcgagaacaccggcttcatcaccgccttctccacctggtccctcgagctccacccc
gtcttcgctcacaccactaccagcttttcagggcacctggccgagatggagcgtgtcctc
cagttcgactctgccgacccttccgccagcctcgtcgacaacctcagggcctacctgcag
atcgtcgacgtctcgtccatcttgggcgtggaccgtgacatctcagaccacgccgtccaa
ttgttcagggattgcgcctccaccacctgcctcaggaaccgcaatatcgaggccctcgcc
accgctgccctgcttcaggctatccgggaagcacaggagcccagaacccttcaggaaatt
tcagcggcagccaatgttgcccagaaggagatcggcaagtacctcaagtttctggtggag
gcacttaaattaagccagcccattaatagcaattccatatccgttcacatgcccaggttc
tgcacgctcctccaactcgacaaatccactcaggatttggcaacctacattggcgaagtc
gtgacaaacaaatgcttctgtactcgccggaatccaataagcatttcggcggcagccatc
tacctatcctgccagttggaagataagcggaaaactcaggctgaaatatgtaaggtgacc
gggctaacggaggttaccctgcgtaaggtttacaaggagcttcttgagaaccgtgacgac
cttcttccacccgattacactccggctgtcccactggacaaggcgttccccatgacaact
gtcgcctccggccgctcaacatctctgaagcccgatgtcgtggatctctcttcctcttcg
accggccaggctaagctcttaaatgacacaacaaaacccagaaagattcaagaaggtaca
gagggggatcaacaccaacaggcagggaaaggcaaggagaaggaggcagagtatcgggac
gctgctcttcggggctccccattaacggaaagagcaaacaacaacgatccgggtgcctta
cagtggcagtcttcacttctattccgtatgcctgctctgagggaaagcgggagctctaca
aggccagaaagagacatagacattaatgaggcgcagccatgctctcgagaagaaggtgac
tgcaagcacaagggagccggttccgggaattcgggtggtttccttccaggtagtggttgg
cgtttttctgcttctcgttcaaccgaagctcatgcaccgccagtctatcaaaaattgact
gctgggttgattgggcacgtagatcagttacaagtcaagaaggggaatctcccaggcgtt
gaaggcaaaagccacaggaagtga
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