KEGG   Nymphaea colorata (blue-petal water lily): 116260804
Entry
116260804         CDS       T07418                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
ncol  Nymphaea colorata (blue-petal water lily)
Pathway
ncol03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncol00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116260804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncol03019]
    116260804
   03041 Spliceosome [BR:ncol03041]
    116260804
   03032 DNA replication proteins [BR:ncol03032]
    116260804
Messenger RNA biogenesis [BR:ncol03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     116260804
Spliceosome [BR:ncol03041]
 Complex A
  U1 snRNP components
   Sm proteins
    116260804
  U2 snRNP components
    116260804
 Complex B
  U1 snRNP components
    116260804
  U4/U6.U5 tri-snRNP components
    116260804
 Complex C
  U2 snRNP components
    116260804
DNA replication proteins [BR:ncol03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     116260804
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 116260804
NCBI-ProteinID: XP_031495164
LinkDB
Position
9:complement(20240358..20245541)
AA seq 133 aa
MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIRGKGSSLGVGRGRAVAMRARAQAAGRAA
PALGRGVAPPVRR
NT seq 402 nt   +upstreamnt  +downstreamnt
atgagcagaagcttgggtattccggtgaagctgctacacgaggcgtccggccatgtggta
acggtagagctgaagagcggcgagctctacagagggtccatgatcgagtgcgaggacaat
tggaactgtcagctcgagaacatcacctacactgccaaggatggaaaggtgtcgcagttg
gagcatgttttcattcgtggtagcaaagtcaggtttatggtgatccctgatatgctgaag
aatgccccgatgttcaaacgtctggatgcaagaattaggggaaagggctcttcattggga
gttggccgtggccgtgctgttgcaatgcgtgcaagagctcaggcggcagggcgcgcagcc
cctgctcttggaaggggtgtggcaccaccagtgaggaggtag

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