Nymphaea colorata (blue-petal water lily): 116260834
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Entry
116260834 CDS
T07418
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116260834
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
116260834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
116260834
NCBI-ProteinID:
XP_031495209
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All DBs
Position
9:23644646..23653858
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AA seq
723 aa
AA seq
DB search
MASMYHSGGPGRPPPPSAFPPQSQQQQQPPPPPPPSMASSFRPNHNPPPAPSLQPNQYPP
AHPHHQQSYRPPPYHQPPHAPPPSGPSHNFNQMRPNYGSAQFPQQYPYPHLPPPPLQPPP
PPPPNNPQVVPPPPLPPSLPPPPPPPPSSNSQHLLPPPPPPPGPAPQYYSSSQYPQYPPP
SSPPPPPPSSPPTLPPPPPNPPPTASGIRPVQSHASHHHRQKERPAASVQKPGRDAQAAA
RVETEEERRIRKRKEYERQRMEEKQRRLMKESQATVLHKTNLLSSGAKMHGSVTGSRGVE
RKAPFLTADRVENRLKKPTTFLCKLKFRNELPDVTAQPKLLTMSTNKDRYTRYAITSLEK
MHKPKLFHEPDLGIPLDLLDISVYNTPSIRPPLAPEDEELLRDGDVATPVKLDGIRRKDR
PTDKGVSWLVKTQYISPISLDAAKQSITEKQAKELRETREGRNLFLETLNNRDKQIQAIE
ESFKASKSRPVHQTKPQLEPVEIWPLLPDFDRYEDRFVTVAFDNDPTADSEIYSKLDRDI
RDDLESKAVMKSFVITGSDPSKPEKFLAYMVPGPEEVSKDMFDESEDVVYSWIREYHWDV
RGDDAEGPTTYLVHFDESAARYLPLPTKLVLQKKKAKEGRSAEDADTHYPAPSRVTVRKG
SSVFIGDQNEHGRISSDHDYANNKRGISNSKRGRSPIEDNNEKRRRTEHELGLEHFSGDD
LSD
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatgtatcacagtggtggtcctggaaggccaccacctccctctgccttcccg
cctcaatcacagcagcaacagcaaccgccgccaccacctcccccatcaatggcctcctcc
ttcagacctaaccacaaccctcctcctgctccctcccttcaaccgaatcaataccctccc
gcccatccccaccaccagcaatcttaccgccctcctccctatcaccaacctcctcatgct
cctcctccttctggcccttctcataatttcaaccaaatgcgccccaactatggatctgcc
caattccctcaacagtacccatatccccatctccccccaccgcccctgcagcctcctcct
cctccaccaccgaacaatcctcaggtcgtccctccacctccgcttcctccttccttgccc
ccacctcctcctccgcctccatccagcaattctcagcatcttcttcctcctcctccgccc
ccgccaggaccagcgccccagtactactcctcttcgcagtatcctcaatatcctcctccc
tcttctcctccgcccccacctccgtcgtctcctccgacgctaccaccgcctcccccgaac
ccacctcctactgcctctggaatcaggccagtacagtcgcacgcttctcatcatcataga
caaaaggagcgccctgctgctagtgtgcagaaacccgggcgggacgcgcaggctgctgcc
agggtggagactgaagaggagaggaggatccgaaagcggaaggagtacgagcggcagagg
atggaagagaagcagcggcggttgatgaaagagtcgcaagcaaccgtgctgcataagact
aacttgttgtcttcaggtgcgaagatgcacggctccgtaactggatcgaggggtgtcgag
aggaaggctccatttcttaccgcggatagggtggaaaacagactaaagaagcccaccacg
ttcttgtgcaaattgaagttcaggaatgaacttccagatgtaactgcacagccgaaactc
ttaaccatgagcacaaacaaagatcgatatacccgatatgccattacatccttggagaag
atgcacaagccaaagctttttcatgagcctgatcttggaataccacttgatctacttgat
atcagtgtatataatacccccagcataaggccgcctcttgctcctgaagatgaagaattg
ttgcgtgacggtgatgtagcaacacctgtcaaactagatggaatcagaaggaaggatcgc
cctactgataaaggtgtttcctggttggtcaagactcaatacatctcacctattagcttg
gatgctgcaaaacagtctataactgaaaaacaagctaaggaattgcgggagacaagggaa
gggcgtaacctgttcttggaaaccctcaataatagggacaagcaaatccaggccattgaa
gaatcatttaaggcatccaagtcgcgtccagtacatcaaaccaaaccccaactggaacct
gttgagatttggccactattacctgattttgataggtatgaagataggtttgttacagtg
gcttttgataatgatcctacagctgattccgaaatctacagcaagttagatcgtgatatt
cgtgatgatcttgaatcaaaggctgttatgaagagttttgtgatcactggttccgaccca
tctaaaccagagaagttcctggcgtatatggttcctggccctgaagaggtttcaaaagat
atgtttgatgaaagtgaagacgtggtatactcgtggatcagagagtatcactgggatgtt
agaggtgatgatgcagaaggtcccaccacatatcttgttcattttgatgaatcagccgcc
agatatttgcctctacccacaaagcttgtattacagaaaaagaaggcaaaggaaggaaga
tctgcagaagatgctgatacccattatcctgcaccctcaagagtgacagtgaggaagggt
tcatctgttttcattggtgaccaaaatgagcatggaagaatttcctctgatcatgattat
gctaacaataaaagaggcatttccaactcaaagcggggaaggtctccaattgaagacaac
aatgagaaaaggcgtagaacagaacatgaactgggcttggaacattttagtggagatgac
ctgtcagattga
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