Nymphaea colorata (blue-petal water lily): 116260960
Help
Entry
116260960 CDS
T07418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116260960
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116260960
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
90S particles
Helicases
116260960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
HTH_MCM7
Utp25_C
ParD_antitoxin
AAA_19
Motif
Other DBs
NCBI-GeneID:
116260960
NCBI-ProteinID:
XP_031495371
LinkDB
All DBs
Position
9:complement(13888907..13898320)
Genome browser
AA seq
521 aa
AA seq
DB search
MGIDSILFAGTRFDRKKFAKDIAKFTKKHVEEPNSIVEALKEEPIARLESRKKGKQRAES
ETVDSFHVFKSSEPEMMDLGKRKLTEKKSNSKIKELNRQIEMAALARKKYGIHVAGQNIP
SPLNDFAELSTRYKCKPRLLQNLSELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTL
AFLCPILMKLKKGSEDGVRAVILCPTRELAAQTTRECKKFAKGRKKFFIRLMTKELSKCG
DFKNMPCDILVSTPLRLEHAITKRKLDLSRVEYLVLDESDKLFELGFLEQIDAVVGACSN
PSIVRALFSATLPDSVEELARTIMHDAVRIIVGRKNSASNLIQQKLIFAGNEEGKLVAIR
QFFAESLNPPILLFVQSKERAKELYRELEFANIRTGVIHADLTQAEREDAVDSFREGKVW
ILIATDVVARGMDFKGVNCVINYDFPESAAAYIHRIGRSGRAGRRGEAVTLYTEADLPFL
RNIANVMVASGCEIPSWILTLPKLRKRKHRPQRDSIAAVPY
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgattctatcctctttgctggcacccgattcgatcgaaagaagtttgccaaa
gacatcgccaagttcacaaaaaagcatgtagaagagccaaattcgatagtggaagctctg
aaggaggagcccatagccaggctggaatctagaaaaaaggggaaacaaagagctgaatct
gaaaccgtggatagttttcatgtattcaagagttcagaacctgaaatgatggatcttggt
aagagaaagttaacagagaagaagtccaattcaaagatcaaagagctcaatagacagatt
gagatggcagctcttgcacgaaagaaatatggaatccatgttgctggccaaaatattcca
tcaccacttaatgattttgcagaattgagtacgaggtacaaatgtaaaccacgcttactc
caaaatttgtcagagcttggttttaaagagcccacacctattcaaaggcaggctattcca
gtactcctctcagggcgtgaatgctttgcttgtgcgcctactggttcagggaaaacttta
gcttttctttgtcctattctgatgaaattgaagaaaggatcagaggatggggtccgtgct
gtaatactttgtcctacaagagaattagctgctcagacaaccagggaatgcaagaaattt
gccaaaggaagaaaaaaatttttcatccgcttgatgactaaggaattgtctaaatgtggg
gatttcaagaatatgccatgtgatatccttgtatctacacccctacggttggagcatgcc
attaccaagagaaagcttgacctgagcagggttgagtatcttgtcctggatgaatccgat
aagctttttgaacttgggtttctggaacaaattgatgcagtggttggtgcatgctcaaat
ccttcaattgttcgtgctttgttcagtgcaacactacctgattctgttgaagagcttgca
cgcacaattatgcatgatgctgttcgaattattgtgggcagaaagaactcagcatcaaac
ttgatacagcagaagctaatatttgctgggaatgaagaaggaaagcttgtggcaattaga
cagttctttgcagagagtctcaacccacctattctcttatttgttcaaagcaaggaacgg
gcaaaggagctttacagggaattggaatttgctaacattaggactggtgttattcatgct
gatctgacacaagcagagcgtgaagatgcagtggatagcttccgtgagggcaaggtatgg
attttaattgcaacagatgtggttgctcgtggcatggattttaagggtgtcaactgtgtg
atcaactatgactttccagagtcggctgcagcatacatacatcggataggtcgatccggc
agagctgggaggagaggtgaggccgtcacattgtatacagaagccgatcttcccttcttg
cggaatattgcaaatgtgatggtggcttcaggttgtgaaatcccttcatggatcctaacc
ttgccaaagctaaggaagagaaaacacagaccacagcgagattccatagctgccgtcccc
tactag
DBGET
integrated database retrieval system
