Nymphaea colorata (blue-petal water lily): 116261100
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Entry
116261100 CDS
T07418
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116261100
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
116261100
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
116261100
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Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Lipase_GDSL_2
Motif
Other DBs
NCBI-GeneID:
116261100
NCBI-ProteinID:
XP_031495572
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Position
9:24765938..24774808
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AA seq
567 aa
AA seq
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MKLVTYNVNGLRPRISQHGSLRNLLSSLDADIICFQETKLTRQELSADLVMAEGYEAFIS
CTRTSSKGRPIGYSGVVTFCRVKSAFSSDEVALPISAEEGFTGLLDQSKTRDKKISTSIL
ERLLCAEELEQITEKDLLRVDSEGRCVITDHGDFVLFNLYGPRADSGNPERVRFKMIFFT
ALQKRWEALLSEGKRVIVVGDFNIAPFAIDQCDAGPDFENDRFRRWLRSLLRKEGGPFVD
VFHEIHPERKHAYTCWSQNTGAEEFNFGSRIDLIMIGGPCFHQDADLRGHELFNCHVREC
DIMTQFKRCKSDNDARWKGGRSLKLDGSDHVPVFINICGMPPVPPHSTPPLAARYVPEIR
GLQQTIVSLIQRRPVTAATNDEKIPHNRHGKEKIKHRGYSQLKLLSFFERKVTMPNVNAC
DDATDTSFRQEDLPVREPNSCLEENYMTDSSQISMSRFEDIECQPDSVDASLASMSGAVS
GPGHSTEKDKNRTALVEWQKIQMLMQNSVPLCVGHGEPCVARCVKKPGPNIGRGFYVCAR
AKGPASNADARCDHFQWATSKSKRKQR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgttacttataatgtgaatggtcttaggccacgcatttcccagcatggctca
cttcgaaatttgctaagctctcttgatgctgatatcatttgctttcaggagaccaaattg
acaagacaagaactttcagctgatttagtcatggctgaaggatatgaggcattcatctca
tgtactcgtacttcaagtaaaggtcgccctattggttactctggtgttgtaacattttgc
cgtgtaaagtcggcattttctagtgatgaagttgcattgccgatttcagcagaggaaggg
tttacaggtcttctggatcagtccaagacaagagataagaagattagcacttccatacta
gaaaggctactatgtgctgaggagttggagcaaataacagagaaggaccttctcagagtt
gatagcgaaggccgatgtgtaatcacagatcatggagactttgttctgttcaatttatat
gggcctcgagctgatagtggtaatccagagagagttcgttttaagatgatattcttcacg
gctttacagaaaagatgggaagctttgctaagtgaagggaaaagggtcatagtagttgga
gatttcaacattgcaccttttgccatagatcagtgtgatgcaggaccagattttgagaat
gataggttcagaagatggcttagatctttgctgaggaaagaagggggaccttttgttgat
gttttccatgaaatacatccagagaggaaacatgcatacacttgttggtcacaaaacaca
ggtgctgaagaattcaattttggttcgagaatagatcttattatgattggtgggccatgc
tttcatcaagatgcagatctcagaggacatgaattatttaactgccatgtcagagagtgt
gatataatgacccaatttaaacgatgcaaatctgataacgatgcaaggtggaagggaggg
agaagtctcaagctagatggctcggaccatgttccagtttttatcaatatctgtggcatg
cctcctgtaccaccccacagcacgccacctctcgcagcaagatatgtccctgagatccgt
ggcttgcagcaaactattgtttcactgattcagagaaggccagtaactgctgcaacaaat
gatgagaaaataccacataatagacacggcaaggagaaaataaaacataggggatactct
cagcttaagttactatcattttttgagagaaaagtgaccatgccaaatgtcaatgcatgt
gacgatgctacagatacttcctttagacaggaggatctgccagtcagagaaccaaactct
tgcctggaagagaattatatgaccgattccagtcagatatcaatgagtagatttgaagac
atcgaatgccagccagatagtgttgacgccagtttggccagtatgagtggagctgtctca
ggtcctggtcactctactgaaaaggataagaaccgcactgccctggtagagtggcagaag
atccaaatgctcatgcaaaatagtgtacctctttgtgtggggcatggagaaccatgtgtt
gcacgatgtgtgaagaaacctggtcccaatataggacgtggattttatgtctgcgcccgt
gcaaagggtcctgcatccaatgcagatgcaaggtgtgaccactttcagtgggcaacgtca
aaatcaaaaaggaagcagaggtga
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