Nymphaea colorata (blue-petal water lily): 116261434
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Entry
116261434 CDS
T07418
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116261434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116261434
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116261434
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_12
TPR_2
TPR_16
Motif
Other DBs
NCBI-GeneID:
116261434
NCBI-ProteinID:
XP_031496042
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Position
9:complement(5810910..5845444)
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AA seq
861 aa
AA seq
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MAADADMSGWSDLLHSSTKLLEQATPSAQFPPLQRNLEQLETLSKKLKAKTLRTETPSQS
IAATRLLAREGINAEQLARDLKSFEIKTTFEDVFPSEATTVEEYLQQVHEMAMVSAVQEA
QKDNLRCFNDYMMQVLEDDWQKEKRDFLQSMSRISTMPRKNSAVASSATRSSQVPTTAAR
QPVSVGHSGIELFPLSDKNILEKKASVYSDVVKNLNDTRERGLPFNTATTFKNAYEELNL
ESSGTKSVSMQKIWHLIQTLLGENAARPHEVSRRMSLVIGARRHLEWGHERYILDIIQSH
PAQAALGGAVGNLQRVRAFLRIRLRDYGVLDFDASDARRQPPVDTTWQQIYFCLRTGYYD
EARNIAQSSRASYQFASMLAQWIMSGGLVPPETSAAASEECEKMFRIGDRAGRSGYDKKK
LLLYAMVSGCRRQVDRVLRDLPSLFTTIEDFLWFMLSAVRDDPSRVSSVPIDGLMPYKLE
DLQVYLNKFEPSYYTKNGKDPLVYPYVLFLSIQLLPAVLYLFKEGGDEGYNVDAVHIAIA
LADHGAFSEDTGVRQKLGMLDAFAEVSSIIRQYGSLYLRQGNLPLALEYYAQAAAAVGGG
RLSWVGRGNTDQQRQRNIMLRQLLTEILLRDGGIPFLLGTRGYGEEGELQRFFSDRVIQQ
KFLLEAARQCQEAGLYDKSVEIQKRVGAFGTALETINKCLSEAICASFRGKLDGDSHTAA
LIHAGNDILEAYKYMSESSIQERGLVSEQQLILRQLEAVVVIQKLARSGHHADALREISK
LQFLPLDPRSPDTTADVFQNLSPLVETCVPDLLKVALTCLDNVPDADGMVRILKAKISNF
VANHMSRNWPQDLYDRVARSL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatgctgacatgagcggttggtccgacctcctccactcctccacgaagctt
ctcgagcaagcaactccttccgctcagttccctcctttacagaggaatttagaacaattg
gagacattgtcgaagaagctcaaggccaaaaccctgagaacggagactccaagtcagtcg
atcgccgcgacaaggttattagctcgtgaaggaataaatgcagaacaacttgctcgtgat
ttgaaatctttcgaaataaagacaacatttgaggatgtctttccatcagaggcaacaact
gtggaggagtacttgcaacaggttcatgaaatggcaatggtttcagctgtgcaggaagcc
caaaaggacaatctgagatgcttcaatgattacatgatgcaagttttagaggatgactgg
caaaaggaaaaacgagattttttacagagtatgagtcgcatatctaccatgccaaggaaa
aacagtgctgtagcaagcagtgctactcgctcaagccaggtgccaaccacagctgcaaga
caaccggtttctgttggtcactcgggtatagaactatttcccttgtctgacaagaatatc
cttgagaaaaaggcttctgtttattcagatgttgtgaagaatcttaatgatacaagggag
cgtggactaccgtttaatactgctactacttttaaaaatgcgtatgaggaactgaatctt
gaatcatctggcactaaatctgtcagcatgcagaagatatggcacctgattcagacacta
ttaggggagaatgctgctagacctcatgaagtttctagaagaatgtctttggttattggt
gcaaggagacacctagaatggggacatgaaagatatattctagacataattcaaagtcat
cctgctcaggctgctcttggtggggcagtgggaaatttgcagcgagtgcgagcttttctc
aggatacgtttaagagactatggtgtactagattttgatgcaagtgatgcacgcaggcaa
cctcctgtggatacaacatggcaacagatttacttttgcttgagaactggctattatgat
gaagcaaggaatattgcccagtcttctagagcttcttatcagtttgcctctatgcttgct
caatggatcatgtctggaggcttagtacctcctgaaacttcagctgctgcatctgaggag
tgtgaaaagatgtttagaataggagacagggctggacgatctggctatgacaaaaaaaag
ttactactttatgctatggtctctggctgtcgtcggcaagttgatagggttcttcgggat
ctcccatcacttttcactactatagaggactttttgtggtttatgctttcagcagtaaga
gatgatccgagcagagtttcttcagttccaattgatggtttgatgccatacaaattggaa
gatttgcaggtgtacttgaacaagtttgagccatcctattacactaaaaatgggaaggat
cctctagtctacccatatgtactattcttaagcattcagctgctgccagcagtgttgtac
ctctttaaggaaggtggggatgaaggatataatgtagatgctgtacatattgctatagca
ctagcagatcatggggctttttctgaagatactggggtgagacagaagcttggaatgttg
gatgcatttgcagaagtttctagcatcattcgacagtatggttcgctatacctgcggcag
ggtaatcttccactagctttagagtattatgctcaagctgctgctgcagtaggtggaggc
cgcttgtcatgggttgggcgtggtaatacggatcagcagaggcagagaaatataatgtta
agacagctcctgactgagatcttgctgcgggatggaggtattccttttctgcttggtaca
cgaggttatggagaagaaggtgagttacaacggttttttagcgatagggtgatacaacag
aagttcttgcttgaagctgctcgccagtgccaggaggctgggctttatgacaaatccgtg
gaaatccaaaaacgggttggggcttttggaacagcattggaaacaataaacaagtgcctt
tctgaagctatttgtgcttcatttcgtggtaaattggatggtgatagccatactgctgct
ttgattcatgctggtaatgatattttggaggcatacaagtacatgtctgaatccagcatc
caggaaagaggtcttgtttcagagcagcagttaatattgcggcaattggaggcagtggtt
gttattcagaagttggccagaagtggtcatcatgcagatgctcttagagagatttccaag
ctccaatttcttcctttagatccacgatccccagatactacagctgatgtatttcaaaat
ttatctcctttggttgaaacttgtgtgcctgatttgctaaaagtagccctaacatgcctg
gacaacgtgccagatgcggatggcatggttcgtattttgaaggctaagatttcaaacttt
gtggcgaatcatatgagcaggaactggccccaggatttatatgacagagtggctcggagc
ttgtga
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