Nymphaea colorata (blue-petal water lily): 116261481
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Entry
116261481 CDS
T07418
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116261481
04121 Ubiquitin system [BR:
ncol04121
]
116261481
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116261481
Membrane trafficking [BR:
ncol04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116261481
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116261481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4
zf-RING_11
zf-ANAPC11
zf-RING_5
CxC4
zf-C3HC4_3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
116261481
NCBI-ProteinID:
XP_031496115
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All DBs
Position
9:complement(5680960..5683712)
Genome browser
AA seq
325 aa
AA seq
DB search
MSRNGSTHWCYQCNCLVNVSGRDTICSRCGGGFIQELDGMEGNGPFDFLGFDYEEQPSIR
IMEALSAFLGPRSGRRNRDLDARGRYQGEQPLGFGLGPFVIFRGQMPSGMLNNGGMEIIF
DGGSGIGLRRLPANAGELFMNQDLEELIEQLTMNDRRGPPPASRSSIEALPTIKIGQRHL
RVDSHCPVCKEKFDISTEAREMPCKHIYHSECIVPWLVQHNSCPVCRYQLPAPGASSSSS
RTVTPVDVNPPSSTGQRSGSLRNLSAGDPGWRESNMNSDNQGRRNPFSFLWPFRSGNSSR
GSAGSSSAACEENTQRSYSGWPFSD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaaatggaagtacccattggtgttaccagtgcaactgcctggttaatgtgtct
ggaagggacacaatttgttctagatgtggtggtggcttcatacaagagcttgatggcatg
gagggtaatggcccttttgactttcttggttttgattatgaggaacagcctagtatccga
ataatggaagctttgtctgctttccttggtccacgatctggaagaagaaaccgtgatcta
gatgcaaggggcaggtatcaaggtgaacaacctctcgggtttggtttgggcccttttgtg
atcttcagaggtcaaatgccttctggaatgttgaataatggtggaatggagataatattt
gatgggggatctgggataggattgaggcgccttcctgccaatgctggtgaactttttatg
aatcaggatcttgaggaattgattgaacagttaaccatgaatgacagaaggggacctcct
ccagcatcccgctcatccattgaagccttgccaaccatcaagattggccagaggcacctg
cgtgtggattctcactgccctgtctgcaaagaaaaatttgacattagtacagaagcccgg
gagatgccgtgcaagcacatatatcattctgaatgcatcgtgccatggttggttcaacac
aactcttgccctgtctgtcgttaccagttgcctgcaccgggtgctagtagttccagctca
agaacagtgacaccagtggatgtaaatcctccttcatcaactggtcagagaagtggaagc
ctcaggaatttgtctgctggcgatccgggctggagggaaagcaacatgaactctgataac
caagggaggcgtaaccctttttctttcctctggccctttcgctctggaaattctagccgt
ggttctgcaggaagtagctcagctgcgtgtgaagaaaatactcaaaggagttacagtggt
tggcctttctctgactaa
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