Nymphaea colorata (blue-petal water lily): 116261487
Help
Entry
116261487 CDS
T07418
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116261487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116261487
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
116261487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
KIF9
Diphtheria_T
Motif
Other DBs
NCBI-GeneID:
116261487
NCBI-ProteinID:
XP_031496127
LinkDB
All DBs
Position
9:complement(1035437..1039694)
Genome browser
AA seq
656 aa
AA seq
DB search
MGSEGGKLRSLIEKATHSTSREVDVSILRSIKHMVRSSDDNARAAAEALLEIMKKNHSQV
RYLALLIVDELFMRSKLFRSCVVVDFNQFLSLSVGFRRSCPLPPPLNVASTLRAKSLEFL
EKWNNSFGLHYRQLRLGLDYLKNTLHFHFPNVRERAARSQQERREREARSQEILRTKFEN
LRNNYSSITEEIQSAIVEMEECMHLLHVSKVEDGDEFTDFPHDTVEEFGSLNLRKIRLDS
IKEGKRICEDSDNRPIFDALRELYKVLILRHLKTVQEWLSVLVRVDGVDARFRDSALKQF
IDVRNCMQTMKKKCEELGCVLPDVSDVEDGILWEEGKIKADSPEVETETNRLPENSYGSP
AKEDMVREEAANVPKDSNDETLKEKGETSDSTRKRLLDEAPVVKWGSYLDNWGTKRDFLA
NQRGLEVEGHWGRVDYDATIPAEKIAELSVQATVYKEEQVQIQPCLAPLKKGGLCQRQDL
KVCPFHGPIIPRDSEGNPLELDQSKGDPISDGEGTSREESPLPVNITPEQIARQAVKNVR
KKDKEKEREKQNQQAHKREKLAKVREHNAAVLRELAMASTSQGLGESLGEDIEGFSHNVA
NQKSKKETLASMLRKKTTRRDRLAQRLLNSQATDATIRQMTEADDVSYREAYPNQW
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgagggagggaaactccgatctcttattgagaaggccacgcattcgacctcc
cgagaagtggatgtctccatcctaaggtcgataaagcacatggttcgatcctcagatgat
aatgcccgtgccgctgctgaagcgctactggagatcatgaagaaaaaccactctcaggta
aggtatctagcacttctcatagtagatgagttatttatgcgctccaagctcttcagatcc
tgtgttgtggttgacttcaatcagttcttgagcttgagtgtgggttttagaagaagttgc
ccccttcctcctccgctaaatgttgcttcaactctccgggcaaagtccttagaattttta
gagaaatggaacaattcatttggacttcactacagacagcttcggttggggcttgattat
ctgaagaatacattacatttccactttcctaatgtgcgagaaagagcagctagatcgcaa
caagaaagaagggagagggaagcaaggtcacaggagattttaagaactaaatttgaaaat
ttgaggaacaattactcatcgataactgaagaaatacaaagtgcaatagttgagatggaa
gaatgcatgcatcttcttcatgtctcaaaggtggaagatggagatgaatttactgatttt
cctcacgatacagttgaagaatttggatctctcaacttgagaaagattcgacttgattca
ataaaagagggtaaaaggatttgtgaagacagtgataatagaccaatttttgatgcttta
agagaattatacaaggttctgatattaaggcatttgaagactgtgcaagaatggttatct
gttcttgtacgagttgatggggtggatgctaggttcagagattctgctttgaagcagttc
attgatgtaagaaattgtatgcagacaatgaagaagaagtgtgaagaactaggctgtgtt
cttcctgatgtttctgatgtggaagatggaattctgtgggaagagggcaagataaaggcc
gattcacctgaggttgaaactgaaacaaacaggttacctgagaactcatatggtagtcct
gctaaagaagacatggttagagaagaagctgctaatgttcccaaagattctaatgatgaa
acgctgaaggagaaaggggaaacatctgactccactaggaagagactattggatgaagct
ccagttgtaaagtggggctcgtatttggacaactggggtacgaagcgtgatttccttgct
aatcagagggggttggaggttgaaggtcactggggtagggttgactatgatgcaactatt
cctgcagagaaaattgcagaattgagtgttcaagctacagtctacaaggaggaacaagtc
caaattcaaccatgccttgctccattgaagaaagggggcctttgccagaggcaggacctg
aaagtctgcccatttcatggacctattatccctcgagattctgaagggaaccccttggaa
cttgaccaatcaaaaggcgatcccatcagtgacggagaaggaacatctagagaagaaagt
cctctgccagtgaacattacacctgaacaaattgcacggcaagcagtgaaaaatgtgaga
aagaaagacaaagaaaaagagagagaaaaacaaaatcagcaggcccataagcgtgaaaaa
cttgcaaaagtacgagaacacaatgcagcagttctaagagagttagctatggcttcaacc
tcccaaggattgggtgaatctcttggagaagatatagaaggtttcagtcataatgtcgcg
aatcagaaaagcaagaaggaaacactagcttcaatgctgcgtaagaaaacaaccagaaga
gatcgtttagcacagcggcttctgaattcacaagcaacagatgcaactatcaggcagatg
actgaagcagatgatgtgagttacagagaagcatacccaaatcagtggtaa
DBGET
integrated database retrieval system
