Nymphaea colorata (blue-petal water lily): 116261496
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Entry
116261496 CDS
T07418
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116261496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116261496
03036 Chromosome and associated proteins [BR:
ncol03036
]
116261496
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116261496
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
116261496
COMPASS/SET1 complex (yeast)
116261496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
PQQ_2
Beta-prop_VPS8
Beta-prop_SCAP
PQQ
Cytochrom_D1
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
116261496
NCBI-ProteinID:
XP_031496140
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All DBs
Position
9:complement(13386856..13391503)
Genome browser
AA seq
333 aa
AA seq
DB search
MPGGQLEREEKISVELTEEVLQCMDVGLIFRDYNCKISSLDFHRTANYLVTASDDESIRL
YDVGNATMLKTINSKKYGVDLVCFTPHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRKEWFISGSLDRTVLLWDQRTEKCQGLLRVQGRPAVAYDDQGLVFAIAF
EGGYVRMFDARRYEKGPFDIFSVGGDKSETHVVKFSNDGRLMLLTTVDGYIHVLDSFNGT
LLSSFKVAPVTGGGTLEASFSPDGMFVISGSGNGSVHAWSVRTGKEVASWTSIESDPPVI
KWASGALMFATGSTELSFWTPDLSKLSSMLGTK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgccagggggtcaactagaaagagaggagaagatttcggtggagttgacggaggaggtt
ttgcaatgcatggatgtgggcttgatcttcagagattataattgcaagatcagttcactg
gacttccacaggacagcaaattatttggttactgctagcgacgatgagtcaatccgcctc
tatgacgttggaaatgccacgatgttgaaaactattaatagcaaaaaatatggtgttgat
cttgtttgcttcactcctcatcctacaactgttatatactcttcaaagaatggttgggat
gaatctctgcggcttctttcattgcatgacaacaagtacctgcgatacttcaaaggtcat
catgacagggttgtgtctctcagcttgtgttcgagaaaagaatggtttatctcgggctct
cttgatagaactgtactactttgggatcaacgtactgaaaagtgtcagggtctcttgcgt
gtacaaggtagacccgcagttgcttatgatgatcaaggtttggtcttcgccattgcgttt
gaagggggatatgtaagaatgtttgatgctcgtaggtatgaaaagggtccatttgatata
ttttctgtgggaggagacaaatctgaaactcatgtagtgaaattcagtaatgacgggagg
ctaatgcttctaaccaccgttgatggatatatccatgtgcttgattctttcaatggaaca
ctgctttcaagtttcaaagttgcaccagttacaggtggtggcactcttgaagcatccttt
agccccgatgggatgtttgtaatatctggttcagggaatggaagtgtccatgcgtggagt
gttcggactggtaaagaggttgcttcgtggacaagcattgaaagtgaccctcctgtaatt
aaatgggcatcgggagctcttatgttcgccaccggctccactgaattgtcattctggact
ccagatctaagcaaactgagctctatgctaggaacaaaatag
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integrated database retrieval system
