Nymphaea colorata (blue-petal water lily): 116261742
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Entry
116261742 CDS
T07418
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116261742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncol03041
]
116261742
Spliceosome [BR:
ncol03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
116261742
Complex C
U4/U6.U5 tri-SnRNP related factors
116261742
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
116261742
NCBI-ProteinID:
XP_031496445
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All DBs
Position
10:24015677..24021764
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AA seq
395 aa
AA seq
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MANRTDPSAKSIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHFGGT
YGGNRKATPFMCLVMKMLQIQPEKEIVVEFIKNEDYKYVRILGAFYLRLVGKATDVYQYL
EPLYNDYRKLRRKLSDGSFALSHVDEFIDELLTKDYSCDIALPRVPKRWTLESGGQLEPR
RSALEDDFEEEEEEKEEEDHALENGVNEKDYYRERSPLRERDRDRKHDRHRDRYDRDRDR
DRDRDHGRGRERDREKERDRDRERDRDRDRDRDRYHRDRTRDEKDHIRDRDGRDYRRDRD
RDKERRRSRSRSWSRDRKDRERDDHRKRHRSPSPPGRRKVDGHDDNDGREERKKKEKKEK
KEKKEDVGDGTDHPDPEIAEANRLRASLGLKPLRM
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggctaacagaaccgatccgtcggcgaaaagcatccatggaacgaacccgcagaatctg
gtcgagaagattttgagatccaaaatttaccagaacacctactggaaggagcaatgcttc
ggtctcacagctgaaacccttgttgacaaggccatggagttggaccatttcggtggaact
tatggtggcaacaggaaagcgactccctttatgtgtttggtgatgaagatgcttcagatt
cagccggagaaggaaatcgttgttgaattcattaagaacgaagattacaaatacgttcga
attttaggagcattttatttgcgcttggtgggaaaggcaacagatgtttaccaatatctg
gagccgttgtacaatgattatcggaaattgagacgcaaattatcagatggaagctttgct
ttgagtcacgttgatgagttcatcgacgaacttctcacaaaagattactcctgcgatatt
gctcttccacgtgttcctaaaagatggactctggaatcagggggacagttggaaccaaga
agaagtgctctggaagatgattttgaggaggaagaagaagaaaaggaagaggaggaccat
gccttagaaaatggggtgaatgagaaggactactaccgggaaaggagtcctttgagagag
agggacagggacagaaaacatgatcgacatagagatcgctatgatcgtgatcgtgaccgc
gaccgtgaccgtgaccatgggagaggaagggagagggacagggagaaggaaagggacaga
gacagggaaagagacagagacagagacagagatagggacaggtatcacagggatcgcact
agggatgaaaaggatcatatacgagatagagacgggagagattatagaagggaccgggac
cgggataaagagaggcgtcgaagccgttcaagaagctggagcagggaccgaaaagatcgt
gaaagagatgaccacaggaagaggcatcgcagtcccagccctccaggtcgcaggaaggtg
gatggtcatgatgataatgatggccgagaagagcggaagaagaaagaaaagaaagaaaag
aaagaaaagaaagaagatgtaggtgatggcactgaccaccctgatcccgagattgctgag
gcaaatcggcttagagcatctctgggtctgaagcccttgagaatgtga
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