Nymphaea colorata (blue-petal water lily): 116261764
Help
Entry
116261764 CDS
T07418
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X5
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116261764
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncol01002
]
116261764
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116261764
03036 Chromosome and associated proteins [BR:
ncol03036
]
116261764
Peptidases and inhibitors [BR:
ncol01002
]
Metallo peptidases
Family M1
116261764
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116261764
Coactivators
SAGA/TFTC/STAGA complex
116261764
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116261764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
HEAT_2
CENP-N
Motif
Other DBs
NCBI-GeneID:
116261764
NCBI-ProteinID:
XP_031496470
LinkDB
All DBs
Position
10:14684790..14744480
Genome browser
AA seq
1336 aa
AA seq
DB search
MAKARKPKIEEQKPESSGAVVRHQKLCLSVDTDNKRLYGYTELKISPPESGMVGLHADNM
TIESILVDGEPAAFEFFPHYQHVEDEKRWESVNCTAAAADAASTSYLSSLDKEMAPNLLI
LCSKKVNLSTENQSRDAAEERTQPSLGDKNVKLVRIDYWVEKAETGIHFRDNIVHTDNQI
RRAHCWFPCIDSSSQRCCYDLEFTVDHKLVAVSNGDLLYQVLSKDDPPRKTYVYSMSVPV
TAECISLAVGPFEIFPDRQNAMITHLCLTSNLSRLRHTVGFFFNVYSYFEEYLSASFPFG
SYKQVFLMPEMTISSVSLGASMCIFSSQVLFDEKVIDQTIDTRIKLAFALARQWFGVYIT
AETPNDEWLLDGLAGFLSDLYIKRFLGNNEARYRRYKANCVVCKADFDGATALSSSAAST
ELYGTQRLGLIGKIRSWKAVSVLEMLEKQMGPESFRKILQTIISNAKDPIRPSRTLSTKE
FRHLANKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRRNMMELAVLRGCTAAAEST
VAIFRDNLETDPRGGDVGWPGMMSIRVHELDGMYDHPSLPMAGDTWQLLELQCHSKLAAK
RIQRPKKGSKPDGSDDNGDATSAVDIRSGLESPLLWVRVDPEMEYLAEIHFHQPVQMWIN
QLEKDKDVVAQSQAIETLQMLPQLSFAVVNALNNFLNDSKGFWRVRVEAAFALAHTASEE
TDWAGMQHLIKFYKSRRFDPNISLPKPNDFHDFPEYFVLEAIPHAIARVRSAHNKSPKEA
VEFVLQLLKYNDNSGNPYSDVYWLSALVQSIGELEFGQQSVLSFLSLLKRIDRLLQFDRL
MPSYNGILTLNCIRTLTQIALKLSVAVPLDRVVELIRPFQNVALWQIRIEASRALLDLEF
HGKGLDDALILFMQFIDKEPSLRGQVKLARHVLRMCQSICAFGSCDTVKSTTLIGLLRHL
GCLKAFNNVFLRHQLFCILHTLAGRPPTLYGVPRVAVHPMPDPESCSEPQIRPSMLKLKI
SKPQDPPPPELTVISSEACHSAETNKEAEAVSNGTERRLPVVKIRVKQNSIIPRVDTEHL
MENSQGRPIEVDLAGSSSASVDAPVRIMSEPVSISNQNVEEVNSSHDHGSRMTASVGSAK
FVKEEDIGKELQCTADSKGVVLVDSKRVALEDRSSPSTKNDDVEREAEGYAAMHADTVQV
NNPSRSSDMHDSMEINCLQQKSDLKVKVKKKEKEGKRKRDDPEYLERKRLKKEKRRSEKE
KAKLGNKEANKGENVSAAVASVQYAKLQTTNPAAVEHRPTNVAETKAEASEVGSSLPKIR
LKFKGRNIISQSQRDL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagctcgcaagccgaagatcgaggagcagaagccggagagctccggtgcagtc
gtccgccaccagaagctctgcctctccgtcgacacggataacaaacggctctatgggtac
accgaactgaaaattagtccaccggagagcgggatggtaggattacatgctgataacatg
acgatagaaagtattttggtagatggcgagccggcggcatttgaatttttcccccattat
cagcacgttgaagatgaaaagagatgggagtcggtgaactgcactgctgctgctgctgac
gctgctagcacgagctatttgtcgtctttggacaaagaaatggctccaaatctgcttatc
ctgtgtagcaagaaagtgaatttaagtactgaaaatcagagcagggacgctgctgaagaa
aggacacaaccttcgttgggtgacaagaatgtaaaattggttcgcattgattattgggta
gagaaggcagaaacaggcatccattttagggataacatagtccatacagataaccaaata
aggcgtgcacactgttggtttccttgcatagacagcagttcacagcgttgctgctatgat
ctggagtttacagtggaccataagcttgttgctgtcagcaatggagacttactttatcag
gttcttagtaaggatgatcctccgcgcaagacctatgtctatagtatgagtgttccagtt
actgcagagtgcatatcgttggcagttggacctttcgagatattcccagaccgtcaaaat
gcaatgataacacatctatgtctaacttctaacctatctaggcttcggcatacagtgggt
tttttctttaatgtttatagctattttgaagagtatctttctgcatcatttccatttggt
tcatacaaacaagtttttcttatgcctgaaatgactatttcttctgtaagcttgggggca
tcaatgtgtattttcagttctcaagtgctgtttgacgagaaagtaattgatcagacaatt
gatacaaggataaagctggcatttgcccttgcaaggcagtggtttggagtgtatataact
gctgaaacaccaaatgatgagtggcttttagatggtcttgctggctttctttctgacttg
tatataaagcgttttcttggaaataatgaagctcgatatcgccgttacaaggccaactgt
gttgtttgcaaggctgattttgatggggcaactgctttgagttcttctgcagcttcaact
gagttgtatgggacacaaagattaggtctaattggaaaaatacggtcctggaaagctgtg
tcagttcttgaaatgttagagaagcagatgggtcctgaatcgttccgcaagattttacag
accataatttctaatgcaaaagatcctatacgaccctcaaggacacttagcacaaaggag
ttccgacacttagctaacaaagttgggaatcttgaacgcccatttctgaaggagtttttc
ccgcgttgggttggatcctgtggatgccctgtattgagaatgggcttgtcctataacaaa
agaagaaacatgatggagctggcagttctacgtggttgtactgctgcagccgagtccaca
gttgccattttcagggataacctggaaaccgatccacgaggaggtgatgtaggatggcct
ggcatgatgagtatcagagttcatgaattggacgggatgtatgaccatccaagtttacct
atggctggagatacttggcagcttctggagctgcaatgtcattctaaacttgcagcaaag
cgcattcaacggccaaagaaaggctcaaaacctgatggatctgatgacaatggtgatgcc
acaagtgctgtggatattcgttctggcctggaatcccctttgttgtgggttagggtggac
ccagaaatggaatatttggcagaaatccattttcatcaacctgtacagatgtggataaat
caactagagaaagataaggatgttgttgcacaatcccaagccatagagacactacagatg
ttacctcagttgtcctttgccgtcgttaatgcactcaataattttctcaatgactcaaag
ggcttttggagggtccgtgttgaagcagcctttgcattggctcacacagcctctgaggaa
actgattgggctggaatgcaacatttgattaagttttataaaagcagaagatttgatcct
aatattagtttgcctaagccaaacgacttccatgatttccctgaatattttgttcttgag
gctataccacatgcgattgccagggtcagatctgcacataataaaagtccaaaagaagct
gtcgaatttgttctacaactattaaagtacaatgataacagtggaaatccatactctgat
gtctactggttatctgcactagttcagtccattggggagcttgaatttggtcagcagagt
gttctgagtttcctttctcttctcaagcgaattgatcgcctcttgcagtttgacaggttg
atgccaagctataatgggattttgacactaaattgcatccggacactgacacaaattgcg
ctgaagctctctgttgctgtgcctcttgaccgtgttgtagaactcataagaccattccag
aatgtggctttatggcaaattcgaatagaagcaagcagagcgctccttgatctagagttt
catggaaaaggcctcgatgatgccttgattttgtttatgcaattcatagacaaagagcca
tctctgagagggcaagttaagctagcaaggcatgtcctgcgtatgtgtcagtcgatttgt
gcatttggatcctgtgataccgtaaagagcactactcttattggactattgcgtcatctt
gggtgtttaaaggccttcaataatgtcttccttcgccatcagttattctgcatattgcac
acacttgcaggaaggcctcccacactttatggtgttcccagggttgctgtgcaccctatg
ccggatccagaaagctgtagcgaaccacagattagaccatcgatgctaaaattaaaaatt
tcaaagccacaagatccgccacctcctgaattgactgtaatctcatcggaggcatgccat
tctgctgaaacaaacaaggaagcagaagcagtatctaatggaactgagcgcaggttgcct
gtggtaaaaattcgagttaaacagaactctataattcctagagttgacacggagcatctg
atggaaaactctcaaggaaggccaattgaagtggatttggcaggtagcagctcagcatcg
gtagatgcccctgtgagaatcatgagcgagcctgtcagcataagcaatcaaaatgttgaa
gaggtaaactcttcacatgaccatggatcccggatgactgctagtgttgggagtgcaaag
tttgtcaaagaggaagacatcggaaaggagttgcaatgcactgccgattcgaagggagtg
gtgttggtggactcgaagagggtcgcattggaggaccggtcgtcacctagcaccaagaat
gatgatgtcgaaagagaagcggaggggtatgcagctatgcatgcagacactgttcaggtc
aacaatcccagtagaagttcagacatgcacgatagcatggagataaattgtttacagcag
aaatcagacttgaaggtgaaggtgaagaagaaagagaaggaggggaagcggaagcgtgat
gaccctgagtatttggagaggaaacgtctgaaaaaagagaaaaggcgaagtgagaaagag
aaggcaaagttggggaacaaagaagcaaacaaaggggaaaatgtttcagctgctgtggca
agtgttcaatatgccaaattgcagacgacgaatcctgctgcggttgaacatagaccaaca
aacgttgcggaaactaaagcggaggcttctgaagttggtagctcattgcctaaaatccga
ctcaaattcaagggtcgaaatataattagtcagtcacagcgagatctataa
DBGET
integrated database retrieval system
