Nymphaea colorata (blue-petal water lily): 116261818
Help
Entry
116261818 CDS
T07418
Name
(RefSeq) SWI/SNF complex subunit SWI3C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116261818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116261818
03036 Chromosome and associated proteins [BR:
ncol03036
]
116261818
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116261818
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116261818
PBAF complex
116261818
GBAF(ncBAF) complex
116261818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116261818
NCBI-ProteinID:
XP_031496561
LinkDB
All DBs
Position
1:5780460..5796089
Genome browser
AA seq
780 aa
AA seq
DB search
MSASPSLPPPAKKIKLKRKRENNLGLHRGASEEDEAQLANMQDGDGSPVTNSDFWTDPPP
EVFPNKGIRISDFPAAVKQKVGRPHSSVFTLVAAEQAVFSSDPVDERSRVHSFFLENISH
GQLQVLSRIPADCPALVPLDQEKPESSSFLCTPPSIAEGRGALRWFKVPDQAGALVHILP
THADWFSSTKIHRLERQVVPRYFTGKSNDCTPEKYMDIRNKIVTKYLECPEKMLTISDCQ
GLADVNIQELSRIVRFLDQWGIINYRAASTHRSNYSGSGVVPTIQEDYNGELHLPSAYLR
SIDSLIYFDKPRSRLREEDVSSLSVGSVEVMPDLDKRIRERLTENRCHHCAQPCSCIYYQ
SQKEAEAILCSDCFHDGKFIVGNSSIDFLKVDAVKDSNDLDSDTWTDHETLLLLEALEIH
NDNWNEIAEHVGTKSKAQCILQFVRLPMEDCFLESIEFPTSVFSSDIAKEGSRTKFPMAN
GDSLACHHEEVDSEGRLPFANSGNPLMSVVSFLATAMGPRVAAACAHSALALLSRVGSNS
ISAGNLSQLEGASQGDRGNSENMHQDGMQGSLGHHKEESQTETKESVERLSPEIVKAAAR
AGLSAAAMKAKLFADHEERDIQRMSATIINHQLKRIELKLKQIGEIETLLLKECDQVERA
RQRIAADRARLLSSRFAGPVSSPLPTVGAAAAVTTSNRPVMPASAPQPTVPAFNQQVNHP
AMSFMPRQPMFAFGPRVPLSALHPPPPVPTGPVMVNSPSPNPSVSHSMLRPVSGTNTNVN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttccccttctctgcctcctcctgcgaaaaagatcaagctcaagagaaagaga
gagaacaacctaggcctgcacagaggagcttctgaggaggatgaggcacagcttgccaat
atgcaagacggagacggttctccggtaaccaactcggatttttggacagaccctcctcct
gaggtctttccaaacaagggaatacgaatctcagacttccctgcggcggtgaagcagaaa
gttgggcgtccgcattcttccgttttcacccttgtagcagcggagcaggccgtcttttct
tcggaccccgtcgacgagagatcaagagtccattctttctttcttgagaacatttctcat
gggcagctccaagtattgtctaggattcctgctgattgtcctgctcttgttccgctggac
caggagaagccggagtcatcgtcatttctctgcactccgcctagtatagcagaaggaaga
ggcgcccttagatggtttaaggttcccgatcaagcgggcgcactcgtacacatattgccc
actcacgctgattggttttcctccactaagatacatagactagaaaggcaagtagttcca
agatactttacaggaaaatcaaatgattgcacaccagaaaaatatatggacataaggaat
aagatcgtcacaaagtatttagagtgtcctgagaagatgcttactatcagtgattgccag
gggttggctgatgtcaatattcaagagctgagcaggattgtacgatttttagaccaatgg
ggaatcattaattacagggcagcaagtacacacaggagtaactattctggttctggtgtt
gttccaactatccaggaggattataatggagaactccatcttccatctgcctacctaagg
tccattgacagccttatttactttgacaaaccaaggagcaggctcagagaagaagatgtt
tcttcactttccgtaggttctgttgaagtcatgcctgatttggacaagagaatccgggaa
cgactgactgaaaaccgttgccaccactgtgcacagccttgttcttgcatctattaccag
tcacagaaagaggctgaagcgatcctttgttcagattgctttcatgatgggaaattcatt
gttggcaattcaagtatagattttttgaaggtggatgcagtaaaagattcaaatgatctt
gatagtgacacctggactgaccatgagacacttttgttgcttgaggcattagaaattcac
aatgacaattggaatgaaattgcagagcatgttgggacaaaatcaaaagcacagtgtatt
cttcagtttgttcgtctgcctatggaggattgttttctcgaaagtattgagtttcctacc
tcagtgttttcgtctgatattgccaaagaaggaagcagaactaagtttccaatggccaat
ggagactctttagcttgtcaccacgaggaggtcgattctgaaggtcgtctcccttttgca
aattctggcaatccacttatgtctgtggtttccttcttggccactgcaatgggaccacga
gttgcagccgcttgtgcacattcagcacttgcattattatctagagtagggagcaattcc
atatctgccggtaatctgtcacagttggagggtgcttctcaaggtgatagaggaaattca
gaaaatatgcatcaagatggcatgcagggaagcttaggacatcataaagaggaatctcaa
actgagaccaaagaatctgtggagcggttgtcacctgaaatagtgaaagctgctgccaga
gctggactatctgctgcagcaatgaaagcaaaactgtttgctgatcacgaagaacgtgat
atccagcgaatgagtgcgactattatcaaccatcagctgaaacgaattgagctcaagctg
aagcagattggtgaaatagagactctgctgttgaaggaatgtgatcaggttgagagggct
agacagagaattgcagctgaccgtgcacgccttctatcaagtcgatttgctggacctgta
tcttcccctcttcccacagtgggagcagcagcagcagtcacaaccagtaatcggccagtg
atgccagcttcagcaccacaaccaacagttcctgcttttaatcagcaagtgaatcatcca
gcaatgtctttcatgcctcggcagccaatgtttgcttttggtcctcgtgttccactctct
gctttgcatccaccaccacctgtgccaactgggcctgtcatggttaattccccatctcca
aatcctagcgtttctcattccatgttgagacctgtttctggtactaacacaaatgtaaat
taa
DBGET
integrated database retrieval system
