Nymphaea colorata (blue-petal water lily): 116262107
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Entry
116262107 CDS
T07418
Name
(RefSeq) phytochrome A1
KO
K12120
phytochrome A
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
116262107
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Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
116262107
NCBI-ProteinID:
XP_031497059
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Position
10:18724596..18730784
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AA seq
1126 aa
AA seq
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MSSSRPSQSSSSSSRTRRSARIIAQTTVDADLHADFEESGSSFDYSRSVAATRTVSVDQA
RSEKVTAYLQNIQKGKLIQPFGCLLVLDEKSFRVIAYSENAAEMLTMSSHAVPSVGDLPV
LGIGTDLRSIFTSTSVASLQKAAGFAEVSLLNPILVHCKSSGKPFYAIVHRVVSGLVMDF
EPVKPSELPITAAGALQSYKLAAKAIARLQSLPGGSISRLCDTVVEEVHQLTGYDRVMTY
KFHEDDHGEVVSEIRKPDLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKPVKVYQ
DENLQTDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVINEGEDEGEDETEPNQRSQQ
QKRKRLWGLVVCHNTSPRFVPFPLRYACEFLMQVFAIHVNKEVELENQMREKNILRTQTL
LCDMLLRDAPLGIVSQTPNVMDLVKCDGAALLYGSKLYLLGRTPTESQIRDIAVWLSEYH
KDSTGLSTDSLYEAGYPGALAIGSIVCGMAAVRITANDMLFWFRSHTASEIRWGGAKHDP
EEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRGSFKEVQITGTENII
HSRMNDLKLEGMKELNVVTNEMVRLIETASAPIFAVDINGLVNGWNTKIAELTGLSVEQV
MGKHLLTLIEDCSVERVKRMLYLALNGEEEQEVQFQMKTHGPQYDSNPVILVVNACSSRD
LHDSVVGVCFIAQDMTEHKLVMDKFTRIQGDYRAIVQNPSPLIPPIFGTDEFGWCSEWNA
AMTKLSGWDREDVVEKMLLGEVFGTHMACCRLKNHDMFVNLGILINNAMVGQEAEKFPFG
FFGRDGKYVNCLLSVSKKLDGKGSVTGVFCFLQLASQELQKALHVQRLSEETAMKKLKAL
SYIRHEIQNPLSGIIFSTGMLEDADLPEEKKPFVVTSIDCQRQLSKILDDVDLQRMIDGC
LDLEMVEFTLEAVLTAAISQVMLRSQEKGIRMIHDYVEQPGLKWLYGDNLRLQQVFANFL
SNAVKFTPRKGLITISVNLLKDSLGKSVHLVHLELRIIHSGRGIPEEYIRQMFGTDQCEV
EDAIGLSICHKILKLMNGDVQYLREADRCSFIISAELALVQEAVRA
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttccaggcccagccaatcttccagtagttcgagtaggacaaggaggtctgct
agaataattgctcagaccactgttgatgccgatctacatgccgactttgaggagtctggt
agttcctttgattactccagatccgttgccgccactaggactgtttccgttgatcaagct
aggtccgagaaggtaacagcataccttcagaacatacagaagggaaaactgattcagcca
tttgggtgcttgttggttttggatgagaagagcttccgggtcattgcgtatagcgagaat
gctgctgagatgttaacaatgtctagccatgccgtccctagtgttggcgatctccctgtc
ctgggaattggcacagatttaagatcgatttttacatccactagcgtcgcatcactgcaa
aaggcggcaggttttgccgaagtttccctgttaaaccccattctggttcactgtaaatcc
tccggtaaacctttctacgccattgtgcacagagtcgtctctggacttgttatggatttt
gagcctgtcaaaccatctgagctgcctatcactgctgctggagctcttcagtcttataag
ctagcagcaaaggccatagctcgcttgcagtcattgccaggtggaagtatcagtagactt
tgtgacactgtggttgaggaggttcatcagctcactggctatgaccgtgtcatgacatat
aaatttcatgaagatgatcatggtgaggttgtgtcggagataaggaaacctgacttagaa
ccatacttgggcctgcactatcctgctaccgatattccgcaggctgccaggttcttgttt
atgaagaacaaggtccggatgatatgtgattgccgtgccaaaccagtgaaggtgtatcaa
gatgagaacctgcaaacggatctgacactatgtggctcgaccttgagggccccccacagc
tgtcatttacaatatatggaaaacatgagttctattgcatcgctggtcatggcagtggtt
atcaatgaaggggaagatgagggggaagatgaaactgagcctaaccaaaggtcgcagcag
cagaagagaaagaggctctggggactggtggtctgccacaatactagcccaaggtttgtc
ccttttcctctgagatatgcttgtgagtttctgatgcaagtttttgctattcatgtaaac
aaggaggttgaattggaaaaccagatgcgtgagaagaacatccttcggacacagacattg
ctctgtgatatgcttctcagggatgctcctttgggaatagtgtctcagacccctaacgtg
atggatcttgtaaaatgtgatggtgctgcgcttttgtatggcagtaaactttatctgctt
ggtcggacacctactgaatctcagatacgcgatattgccgtttggctttcagaatatcac
aaggattctactggtttgagtacagatagtctttatgaagcaggatatccaggtgcactt
gcaattggcagcattgtctgtggaatggctgctgttaggattaccgccaatgacatgctg
ttctggttcagatctcatactgcctctgaaatccgatggggtggtgcaaaacatgatcct
gaggaaaaggatgatggaaggaggatgcaccccagatcctcgttcaaagcattcctcgag
gttgttaaaactaggagtttgccatggaaggattttgagatggatgccatccattctctt
cagctgatccttcgcggatcctttaaggaagtacaaattactggtacggagaacattatt
cattctcgaatgaatgatttgaagcttgagggaatgaaggaactgaatgtggttacaaat
gagatggtgaggctgattgaaactgctagtgccccaatttttgcagttgacataaatggt
ctggttaatggctggaataccaaaattgccgaattgactggtttgtcagtcgaacaagtc
atgggaaagcacctgctcactcttattgaggattgttctgtggaacgtgtgaaaaggatg
ctttatctggctttgaatggtgaagaagagcaagaagtgcaattccagatgaaaacacat
ggccctcaatatgatagcaaccctgtaatcttggttgtgaatgcttgctctagcagggat
ctgcatgacagtgttgttggagtgtgcttcattgcccaggatatgactgagcataagttg
gtgatggacaaattcactcgtatccaaggagattatagagcaatagtacagaaccctagc
ccattgataccccccatttttgggacagatgagtttggctggtgttctgaatggaatgca
gcaatgaccaagctgtctggatgggatagggaggatgtggttgaaaaaatgctgctgggt
gaggtttttggcacacacatggcatgttgtcggctgaaaaatcatgacatgtttgtaaac
cttggcattttaattaacaatgcaatggtgggccaggaagcagagaagttcccttttggc
ttttttggacgtgatgggaagtatgtcaactgtttgctttctgtgagcaagaaacttgac
ggaaagggatcagtaacaggagtattttgtttcttgcaacttgctagtcaagagcttcaa
aaggcattgcatgtgcagaggttatcagaagaaactgctatgaaaaaattgaaggcattg
tcatacataaggcatgaaattcaaaatcctctatctgggatcattttctcaacaggaatg
ctagaagatgctgacttaccggaagagaaaaagccatttgtggttacgagtattgattgc
cagcgtcagcttagcaagatcctagatgatgtagatctgcagcgcatgatagacggctgc
ttggatttggagatggttgagttcacccttgaagctgttctgacagctgcaataagccaa
gttatgctcagaagccaggaaaagggcatccggatgattcatgattatgtggagcagcca
ggtctgaaatggttgtatggggataatctgaggcttcaacaagtctttgctaatttcttg
tcaaatgctgtgaaattcaccccaaggaaaggcctcataacaatttcagttaatctattg
aaagatagcctggggaaaagtgttcatcttgtacatttggagctcagaatcatacattct
ggtcgtggaattcctgaggaatatatcaggcaaatgtttggaactgatcagtgtgaggtt
gaggacgccattggcttgtcaatatgtcataaaatactgaagctaatgaatggggatgtg
cagtatcttcgagaagcagacaggtgttctttcattatttccgcagaacttgctcttgtt
caggaagctgtgagggcataa
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