Nymphaea colorata (blue-petal water lily): 116262281
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Entry
116262281 CDS
T07418
Name
(RefSeq) autophagy-related protein 18c isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116262281
Membrane trafficking [BR:
ncol04131
]
Autophagy
Other autophagy associated proteins
Others
116262281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
LRR_FBXL18
Beta-prop_IFT80_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116262281
NCBI-ProteinID:
XP_031497359
LinkDB
All DBs
Position
10:complement(20808669..20813241)
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AA seq
423 aa
AA seq
DB search
MTTILPSVSSTASTPQGVHSPMGLSGSESSSPRSQASTALHTPFGPESSNGDDTELLSVS
WNQDYGCFSAGTNHGFRIYNCDPFKETFKRDFKNGGFGIVEMLFRCNILALVGGGENPQY
PPNKVMIWDDHQSRCIGELAFRSEVRAVKLRRDRIVVVLEHKIYVYNFSDLELLKQIETL
ANPRGLCVLSHQQNTSVLACPGLHRGQVRIEHFGLKMTKFINAHDSNIACFTLTNDGLLL
ATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPSIQWLAVSSDKGTVHVFGLR
VRVVGEDSATHTNAAQAPLVTHQNSSSSLDALIAPNTGANPSSSLSFMKGVLPKYFSSEW
SFAQFHLREDTRFLVAFGAQNSVIVVGMDGSFYRCTFDAVNGGEMLQQEYFRFLKSDSKH
KGG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactacgatcttgccgtccgttagttctacagcctccacgcctcaaggagttcattca
ccaatggggcttagtggaagtgaatcatcgtctcctcgttctcaagcctctacagccttg
cacacaccgtttggccccgagtctagcaatggcgacgacactgaactgctgtctgtttct
tggaatcaagattacggatgcttctctgctggcactaaccacgggttccgaatctataat
tgtgatcctttcaaggaaacattcaaaagggatttcaagaacggtggatttggaatagtt
gagatgcttttccgctgcaatatattggcacttgttggtggtggtgagaacccgcaatat
cctcctaataaagttatgatatgggatgaccatcagagtcggtgcattggcgagcttgcc
tttcggtctgaagttcgtgctgtgaaattgagacgggacaggattgtcgtggttcttgag
cacaagatatacgtgtataatttttcagatctagaactcctgaagcagatagagacgctt
gctaatcccaggggcttgtgtgttttgtcacatcagcagaatacatctgtgctggcttgc
cctggactgcatcgcgggcaggttcgaattgagcactttgggttgaagatgacaaaattc
attaatgcacatgattcaaatattgcgtgcttcactctgacaaacgatggccttctcctt
gcaactgctagtacgaagggtaccttgatcaggattttcaacacgatggatggaacacgt
ttgcaagaggttcgtaggggagtggacagagcagacatttacagcattgccctttctcca
tccattcagtggctcgctgtgtctagtgacaagggaaccgttcatgtattcggtctcagg
gtgagggttgtgggtgaagattctgctactcatactaatgctgcacaagcaccattggtt
acacatcagaactcttcttcttctcttgatgcccttattgcaccaaatacaggtgcaaat
cctagctcatcattgtccttcatgaaaggagtcctaccaaaatattttagttcagagtgg
tcttttgctcagtttcatttgcgagaagacacacgttttcttgttgcatttggtgctcaa
aattccgtgattgttgttggcatggatgggagcttctataggtgcacctttgatgcggtg
aacggtggggagatgttgcagcaggagtatttccggtttctaaaatctgacagcaaacat
aaagggggctga
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